Dear all,

I would like to use AO and CAO. I could enable/disable AO and set max. memory, but mkl_mic_free_memory is not working.

Here is an example:

      dim = 1024*8

      allocate (A(dim*dim))
      allocate (B(dim*dim))
      allocate (C(dim*dim))

      write(*,*) mkl_mic_enable()
      write(*,*) mkl_mic_set_max_memory( MKL_TARGET_MIC, 0, 1024*1024*6 )
      CALL DGEMM('N','N',dim,dim,dim,1.0d0,&            A,dim,B,dim,1.0d0,C,dim)
      write(*,*) mkl_mic_free_memory(MKL_TARGET_MIC, 0)
      write(*,*) mkl_mic_disable()

!DEC$ OFFLOAD_TRANSFER TARGET( MIC:0 )
     & IN(dim)& IN(A,B,C: LENGTH(dim*dim))

My card has 8GB memory. If AO reservs 6GB memory, there is not enough memory for offload transfer, and it generates offload error (9/13/16). All mkl_mic_... function return with 0 err code. When max. mem. only 4GB, it's working.

Is there any mistake?

(composer_xe_2013_sp1.2.144, composer_xe_2013_sp1.2.144, composer_xe_2015.0.024)

Hi:

    I read the gcc document as well as intel compiler document, they both said that the default behavior will not detect the underlying microarchitecture in linux x86-64 (default is -xsse2). As a result, I need to put -march=nehalem in CXXFLAGS in g++ and put -xsse4.2 in CXXFLAGS in icpc. However, while linking with mkl, there is no flag to tell mkl that my microarchitecture is nehalem:

g++:

g++ -std=c++11 -O2 -march=nehalem -c main.cpp

g++ main.o -lmkl_rt

icpc:

icpc -std=c++11 -xsse4.2 -c main.cpp

icpc -mkl main.o

So, how to guarantee mkl can take full advantage of nehalem and get the highest performance?

Thank you very much

Chaowen GUO

Dear all,

I have the following problem with the LAPACK driver routines used for solving symmetric eigenvalue problems in C++. As the input, I have complex Hermitian matrices with the dimension ~30X30. On these matrices, I run the routines provided by the MKL. In particular I tried the routines "heev", "hpev" and "hpevd" to compute the eigenvalue decompositions including the eigenvectors.

Normally, there is no problem with theses routines. The run time is stable around a certain mean value. However, using one routine many times in a row causes problems:

- After ~ 2 000 000 function calls, at a certain point, the runtime increases to its double.

- After this peak in the run time, there are tremendous variations in the run time and peaks in run times occur regularly.  

- After restarting the application, the run time gets back to normal, however, after many function calls, the run time gets unstable again.

These problems occur with the routines "heev", "hpev" and "hpevd". However, if I use only diagonal matrices for input, the runtime is stable.

What can I do to fix this issiu?

Dear all:

I am facing a problem on how to use lapack_complex_double data type, Including multiply, divide,conjugate(I can do this using z_imag=-z_imag, is this the best way?), and print the results(actually I can print the result, but every time I need a cast (double)z.real, (double)z.imag, which is not convenient).I have tried cast the variable (double complex) z the multiply, but it failed. I will give my sample program. Anyone please kindly show me how I can handle this data type. Please modify on my program so that I can see clear how this is done. I am a novice in both C and MKL programming. I have searched this site and found some similar thread, but I still cannot work it out. 

Below is my program, you can do the matrix element operations using matrix m in it. 

#include    <complex.h>
#include    <math.h>
#include    <stdlib.h>
#include    <stdint.h>
#include    <stdio.h>
#include    <mkl.h>
lapack_int LAPACKE_zheev( int matrix_order, char jobz, char uplo, lapack_int n, lapack_complex_double* a, lapack_int lda, double* w );
//hermitian matrix, each row in output is an eigenvector
void    diag(lapack_complex_double *mat, double *e, lapack_int n)
{
    char    jobz='V';   //also eigenvectors
    char    uplo='U';   //upper triangle
    lapack_int  info;

    info=LAPACKE_zheev(LAPACK_ROW_MAJOR,jobz,uplo,n,mat,n,e);

    if(info!=0){
        printf("matrix diag fail,the %d argument is wrong\n",info);
        exit(1);
    }
}

int main()
{
    lapack_complex_double *mat;
    lapack_complex_double *m;
    double  *e;

    mat=(lapack_complex_double *)malloc(sizeof(lapack_complex_double)*4);
    m=(lapack_complex_double *)malloc(sizeof(lapack_complex_double)*4);
    e=(double *)malloc(sizeof(double)*2);
    mat[0].real=1.0;    mat[0].imag=0.0;
    mat[1].real=1.0;    mat[1].imag=-1.0;
    mat[2].real=1.0;    mat[2].imag=1.0;
    mat[3].real=2.0;    mat[3].imag=0.0;
    *m=*mat;
    *(m+1)=*(mat+1);
    *(m+2)=*(mat+2);
    *(m+3)=*(mat+3);
diag(mat,e,2);

    printf("{(%f,+%fI),(%f,+%fI)}\n",(double)m[0].real,(double)m[0].imag,(double)m[1].real,(double)m[1].imag);
    printf("{(%f,+%fI),(%f,+%fI)}\n",(double)m[2].real,(double)m[2].imag,(double)m[3].real,(double)m[3].imag);
    printf("the eigenvalue is %f,%f\n",e[0],e[1]);

    printf("{(%f,+%fI),(%f,+%fI)}\n",(double)mat[0].real,(double)mat[0].imag,(double)mat[1].real,(double)mat[1].imag);
    printf("{(%f,+%fI),(%f,+%fI)}\n",(double)mat[2].real,(double)mat[2].imag,(double)mat[3].real,(double)mat[3].imag);

    printf("{(%f,+%fI),(%f,+%fI)}\n",(double)mat[0].real,(double)mat[0].imag,(double)mat[1].real,(double)mat[1].imag);
    printf("{(%f,+%fI),(%f,+%fI)}\n",(double)mat[2].real,(double)mat[2].imag,(double)mat[3].real,(double)mat[3].imag);
    free(mat);
    free(m);
    free(e);
    return 0;
}

By the way, I am using gcc, below is my Makefile so that you may need when you compile the above program.

NAME=upload
OBJECTS = $(NAME).c
cc = gcc
MKLPATH=/opt/intel/composer_xe_2013.5.192/mkl/lib/intel64
MKLINCLUDE=/opt/intel/composer_xe_2013.5.192/mkl/include
MODPATH=/opt/intel/composer_xe_2013.5.192/mkl/include/intel64/lp64
FLAGS= -L$(MKLPATH) -I$(MKLINCLUDE)  -I$(MODPATH)    -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core  -liomp5 -lm -lpthread

OUTNAME=$(NAME).out

$(NAME): $(OBJECTS)
    $(cc) -o $(OUTNAME) $(OBJECTS) $(FLAGS)
clean:
    rm -f $(OUTNAME)

Another question is how I can easily do the matrix-matrix multiply and matrix-vector multiply using C program. Is there any function in MKL or something can do this? If so, can you add that to the above program? thanks very much!

Dear all,

How should I cite the MKL and ifort all together in a paper manuscript?

BR,

Umut

hi 

i use mkl c++ compiler 11.0.066 and mkl10.1 and c++/clr vs2008

i use fft and conv function from mkl in multi thread realtime application (each thread exec fft and conv parallel)

but after little time usage memory go up and application crash.

with any leak detector i cant find any leakage in my code .

recently i study mkl help and find i must use mkl_FreeBuffer() after mkl function for avoidance memory leakage

but when i call mkl_freeBuffer Application crash with access violation exception.

what shoud i do?

when error occured last row of call stack is in a fft function and stop after mkl_freeBuffer() like below

mkl_complex16*  intelForwardFft (MKL_Complex16* input,int length)

{

            DFTI_DESCRIPTOR *fft_handle;

           dfticreatedescriptor(&fft_handle,dfti_double,dfti_complex,1,length) ;

           dftisetvalue(fft_handle,dfti_placement,dfti_inplace);

          dfti_computeforward(fft_handle,input);

          dftifreedescriptor(&fft_handle);

          mkl_FreeBuffers();

          return input;     ===>cursor stop here

}

my prog is realtime .this mean that after freebuffer after each fft , my prog again exec fft .  in this situation MKL_FreeBuffer() can solve my memory leakage problem?

i use 64 bit mkl

 additional library directory  -> em64t\lib 

additional dependecy -> mkl_intel_lp64_dll.lib   ;    mkl_intel_thread_dll.lib     ;  mkl_core_dll.lib

thanks for you.

Hi,

I have strange problem where the same program runs slower on a i5-3320M than an Xeon w3680. The main part of the code is FFT. Could anyone shine some light on me? Thanks!

When I run my threaded application (several threads calling Fortran subroutines that use MKL lapack function DGEMM), Im getting the "DGEMM parameter number x had an illegal value" where X could be 8, 10 ...and also 0! Im sure that Im not using shared memory among the DGEMM  calls. Could be this a heap corruption? How can I figure out what is going on (only reproduced once in a thousand execution, for example)

Thanks in advance

Hello everyone,

I am working on a project where it is important to distinguish between 0 eigenvalues and non zero eigenvalues. Using the MKL routine LAPACKE_zheev returns me a list of eigenvalues which include some very close to zero. I was wondering what the precision on those is or rather whether they can be reliably distinguished from a zero eigenvalue by the algorithm.

The only thing I have found on this topic so far is an article in the LAPACK specifications on Error bounds:

http://www.netlib.org/lapack/lug/node89.html

Does this article apply to the MKL routines aswell? I.e. is an eigenvalue larger than EERRBD guaranteed to belong to a non zero true eigenvalue? Is there a MKL routine that can be called to get the errorbound?

If anyone has information on this thanks in advance.

Hi

I am wondering if ARM v8 64bit SoC can be performed by LINPACK tool.

Hello,

I've downloaded Intel Parallel Studio XE Composed Edition for C++ Linux, (composer_xe_2015)  and tried to compile a test program for ScaLAPACK.  However, I cannot find the ScaLAPACK libraries in the lib/intel64.  The only version of libmkl_scalapack_lp64 resides in the lib/mic directory, and LD skips this as incompatible.

Am I missing anything, or ScaLAPACK is not included in the version of MKL distributed with Composer XE 2015?

Thanks for your help!

One of the big new features introduced in the Intel MKL 11.2 is the greatly improved performance for small problem sizes. In 11.2, this improvement focuses on xGEMM functions (matrix multiplication). Out of the box, there is already a version-to-version improvement (from Intel MKL 11.1 to Intel MKL 11.2). But on top of it, Intel MKL introduces a new control that can lead to further significant performance boost for small matrices. Users can enable this control when linking with Intel MKL by specifying "-DMKL_DIRECT_CALL" or "-DMKL_DIRECT_CALL_SEQ". At the run time, the execution will be dispatched to a fast path for small input matrices. The fast path skips error checking and multiple layers of function calls, therefore improves performance by reducing associated overhead. The matrix sizes have to be small, for example, only a few dozens of rows and columns. For larger matrices the regular execution path is taken. MKL_DIRECT_CALL and MKL_DIRECT_CALL_SEQ do not help, but do not do any harm either. 

The chart below is a comparison between 4 scenarios of computing double-precision matrix-matrix multiplication for small matrices (range from 4x4 to 20x20).

• A naive implementation using triple-nested loops, compiled with flags "-O3 -xCORE-AVX2" using Intel C++ Compiler 15.0.
• Using DGEMM from Intel MKL 11.1.1.
• Using DGEMM from Intel MKL 11.2.
• Using DGEMM from Intel MKL 11.2 and with "-DMKL_DIRECT_CALL" enabled.

The matrices used in this chart are all square. The version-to-version improvement of Intel MKL 11.2 over 11.1.1, as well as the additional benefit brought by MKL_DIRECT_CALL, are evident.

How to use MKL_DIRECT_CALL and MKL_DIRECT_CALL_SEQ

These are the macros to be defined at link time to instruct Intel MKL to pick the fast path for small matrices. The first macro, MKL_DIRECT_CALL, is used when you link to the parallel Intel MKL library. The second, MKL_DIRECT_CALL_SEQ, is used when you link to the sequential Intel MKL library. These macros do not have effects on larger matrices.

For a program in the C language on Linux system, simply add -DMKL_DIRECT_CALL or -DMKL_DIRECT_CALL_SEQ to the link line. On Windows, the syntax is /DMKL_DIRECT_CALL or /DMKL_DIRECT_CALL_SEQ. Usually, the flag -std=c99 (/Qstd=c99 on Windows) is also needed. This has been tested on mainstream C and C++ compilers such as Intel C++ Compiler, GCC, Microsoft Visual Studio, etc.

For a program in Fortran, first inlcude "mkl_direct_call.fi". See below for an example from the "Intel MKL User's Guide". Then, add -DMKL_DIRECT_CALL (/DMKL_DIRECT_CALL on Windows) or -DMKL_DIRECT_CALL_SEQ (/DMKL_DIRECT_CALL_SEQ on Windows) to the link line. If you are using Intel Fortran Compiler then pass -fpp (/fpp on Windows) to enable Fortran pre-processing. If you are using PGI Fortran compiler then pass -Mpreprocess instead. This feature does not work with GNU Fortran compiler.

#     include "mkl_direct_call.fi"
      program   DGEMM_MAIN
....
*      Call Intel MKL DGEMM
....
      call sub1()
      stop 1
      end

*     A subroutine that calls DGEMM
      subroutine sub1
*      Call Intel MKL DGEMM

      end

Limitations

There are a few limitations of using this feature.

• The performance gain is a result of skipping error checking and function inlining. There will be no error reported if incorrect parameters are passed to the function call. For this reason, users should not use this feature during code development and debugging. Users should only enable this feature when the code is ready for deployment.
• The "verbose mode" (another new feature introduced in Intel MKL 11.2) does not work for functions that take the fast path enabled by this feature.
• This feature currently does not have effect on C/ZGEMM3 functions.
• This feature does not work with CBLAS function calls.
• The performance benefit of this feature on Intel Xeon Phi coprocessors is marginal. Work is in progress to fully extend this feature to cover Intel Xeon Phi coprocessors.
• CNR (Conditional Numerical Reproducibility) is not supported.
• For Fortran programs, the GNU Fortran compiler is not supported.

Hello,

I need to compile R with shared library (--enable-R-shlib) in order to use a specific IDE (rstudio) and I am running into trouble. Hopefully I'll be able to get some help from you.

I previously had a working installation of R 3.1.1 (without shared library) compiled with ICC and MKL (Composer XE 2013 SP 1.3.174) as follows:

$source /opt/intel/composerxe/bin/compilervars.sh intel64

$export CC="icc"

$export CXX="icpc"

$export AR="xiar"

$export LD="xild"

$export CFLAGS="-O3 -ipo -openmp -xHost -multiple-processes"

$export CXXFLAGS="-O3 -ipo -openmp -xHost -multiple-processes"

$export MKL="-lmkl_gf_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -lpthread"

$./configure --with-lapack --with-blas="$MKL" --build="x86_64-linux-gnu" --host="x86_64-linux-gnu"> log_cfg

$make > log_make_out 2> log_make_err

#make install

When I run the commands above the compilation is successful and log_make_err is empty at the end of the process.

However, as I said before, I now need to compile R with shared library (--enable-R-shlib). Therefore, I tried to use the exact same commands as before and changed the configure line to:

$./configure --with-lapack --with-blas="$MKL" --build="x86_64-linux-gnu" --host="x86_64-linux-gnu" --enable-R-shlib

In this case, the compilation is not successful and log_make_err contains the following:

ld: /tmp/ipo_iccUpPSPh.o: undefined reference to symbol '__kmpc_end@@VERSION'

/opt/intel/composer_xe_2013_sp1.3.174/compiler/lib/intel64/libiomp5.so: error adding symbols: DSO missing from command line

make[3]: *** [R.bin] Error 1

make[2]: *** [R] Error 2

make[1]: *** [R] Error 1

make: *** [R] Error 1

When I run diff on the output of the configure script for each case, nothing strange shows up:

753c753

<   Options enabled:           R profiling

---

>   Options enabled:           shared R library, R profiling

Should it be important, I include all output and error logs below. Thank you very much in advance for your help.

############################ [ ./configure output log (with --enable-R-shlib) ] ############################

checking build system type... x86_64-pc-linux-gnu
checking host system type... x86_64-pc-linux-gnu
loading site script './config.site'
loading build-specific script './config.site'
checking for pwd... /bin/pwd
checking whether builddir is srcdir... yes
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checking whether the C compiler works... yes
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checking whether we are cross compiling... no
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icpc
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checking stdarg.h usability... yes
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checking stdbool.h usability... yes
checking stdbool.h presence... yes
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checking whether sigsetjmp is declared... yes
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checking for GNU C library with version >= 2... yes
checking return type of signal handlers... void
checking for uint64_t... yes
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checking for type of socket length... socklen_t *
checking for stack_t... yes
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checking for uintptr_t... yes
checking whether byte ordering is bigendian... no
checking for an ANSI C-conforming const... yes
checking for icc option to accept ISO C99... -std=gnu99
checking for icc -std=gnu99 option to accept ISO Standard C... (cached) -std=gnu99
checking for inline... inline
checking size of int... 4
checking size of long... 8
checking size of long long... 8
checking size of double... 8
checking size of size_t... 8
checking size of long double... 16
checking whether we can compute C Make dependencies... yes, using $(CC) -MM
checking whether icc -std=gnu99 supports -c -o FILE.lo... yes
checking for icc -std=gnu99 option to support OpenMP... none needed
checking how to get verbose linking output from gfortran... -v
checking for Fortran 77 libraries of gfortran...  -L/usr/local/lib -L/usr/lib/gcc/x86_64-linux-gnu/4.8 -L/usr/lib/gcc/x86_64-linux-gnu/4.8/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/4.8/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/opt/intel/composer_xe_2013_sp1.3.174/compiler/lib/intel64 -L/opt/intel/composer_xe_2013_sp1.3.174/ipp/../compiler/lib/intel64 -L/opt/intel/composer_xe_2013_sp1.3.174/ipp/lib/intel64 -L/opt/intel/composer_xe_2013_sp1.3.174/mkl/lib/intel64 -L/opt/intel/composer_xe_2013_sp1.3.174/tbb/lib/intel64/gcc4.4 -L/usr/lib/gcc/x86_64-linux-gnu/4.8/../../.. -lgfortran -lm -lquadmath
checking how to get verbose linking output from icc -std=gnu99... -v
checking for C libraries of icc -std=gnu99...  -L/usr/local/lib -L/opt/intel/composer_xe_2013_sp1.3.174/compiler/lib/intel64 -L/opt/intel/composer_xe_2013_sp1.3.174/ipp/../compiler/lib/intel64 -L/opt/intel/composer_xe_2013_sp1.3.174/ipp/lib/intel64 -L/opt/intel/composer_xe_2013_sp1.3.174/mkl/lib/intel64 -L/opt/intel/composer_xe_2013_sp1.3.174/tbb/lib/intel64/gcc4.4 -L/usr/lib/gcc/x86_64-linux-gnu/4.8/ -L/usr/lib/gcc/x86_64-linux-gnu/4.8/../../../x86_64-linux-gnu/ -L/usr/lib/gcc/x86_64-linux-gnu/4.8/../../../../lib/ -L/lib/x86_64-linux-gnu/ -L/lib/../lib64 -L/lib/../lib/ -L/usr/lib/x86_64-linux-gnu/ -L/usr/lib/../lib/ -L/opt/intel/composer_xe_2013_sp1.3.174/compiler/lib/intel64/ -L/opt/intel/composer_xe_2013_sp1.3.174/ipp/../compiler/lib/intel64/ -L/opt/intel/composer_xe_2013_sp1.3.174/ipp/lib/intel64/ -L/opt/intel/composer_xe_2013_sp1.3.174/mkl/lib/intel64/ -L/opt/intel/composer_xe_2013_sp1.3.174/tbb/lib/intel64/gcc4.4/ -L/usr/lib/gcc/x86_64-linux-gnu/4.8/../../../ -L/lib64 -L/lib/ -L/usr/lib -L/usr/lib/i386-linux-gnu -limf -lsvml -lirng -lm -lipgo -ldecimal -liomp5 -lcilkrts -lstdc++ -lgcc_s -lirc -lpthread -lirc_s -ldl
checking for dummy main to link with Fortran 77 libraries... none
checking for Fortran 77 name-mangling scheme... lower case, underscore, no extra underscore
checking whether gfortran appends underscores to external names... yes
checking whether gfortran appends extra underscores to external names... no
checking whether mixed C/Fortran code can be run... yes
checking whether gfortran and icc -std=gnu99 agree on int and double... yes
checking whether gfortran and icc -std=gnu99 agree on double complex... yes
checking for gfortran option to support OpenMP... -fopenmp
checking whether icpc accepts -M for generating dependencies... yes
checking for icpc option to support OpenMP... none needed
checking whether we can compute ObjC Make dependencies... no
checking for ObjC runtime library...
checking whether x86_64-linux-gnu-gcc accepts -fobjc-exceptions... no
checking whether C runtime needs -D__NO_MATH_INLINES... no
checking for xmkmf... no
checking whether icpc  supports C++11 features by default... no
checking whether icpc  supports C++11 features with -std=c++11... yes
checking for off_t... yes
checking for working alloca.h... yes
checking for alloca... yes
checking whether alloca is declared... yes
checking whether expm1 exists and is declared... yes
checking whether hypot exists and is declared... yes
checking whether log1p exists and is declared... yes
checking whether log1pl exists and is declared... yes
checking whether log2 exists and is declared... yes
checking whether log10 exists and is declared... yes
checking whether nearbyint exists and is declared... yes
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checking whether powl exists and is declared... yes
checking whether rint exists and is declared... yes
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checking whether va_copy exists and is declared... yes
checking for isblank... yes
checking sunmath.h usability... no
checking sunmath.h presence... no
checking for sunmath.h... no
checking for cospi in -lsunmath... no
checking for atanpi... no
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checking for cospi... no
checking for exp10... yes
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checking whether fcntl exists and is declared... yes
checking whether getgrgid exists and is declared... yes
checking whether getpwuid exists and is declared... yes
checking whether kill exists and is declared... yes
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checking whether sigaltstack exists and is declared... yes
checking whether sigemptyset exists and is declared... yes
checking whether fdopen exists and is declared... yes
checking whether popen exists and is declared... yes
checking whether setenv exists and is declared... yes
checking whether unsetenv exists and is declared... yes
checking whether getrlimit exists and is declared... yes
checking whether getrusage exists and is declared... yes
checking whether getpriority exists and is declared... yes
checking whether chmod exists and is declared... yes
checking whether mkfifo exists and is declared... yes
checking whether stat exists and is declared... yes
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checking whether gettimeofday exists and is declared... yes
checking whether utimes exists and is declared... yes
checking whether times exists and is declared... yes
checking whether gmtime_r exists and is declared... yes
checking whether localtime_r exists and is declared... yes
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checking whether access exists and is declared... yes
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checking whether getcwd exists and is declared... yes
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checking whether link exists and is declared... yes
checking whether readlink exists and is declared... yes
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checking whether sysconf exists and is declared... yes
checking whether sched_setaffinity exists and is declared... yes
checking whether sched_getaffinity exists and is declared... yes
checking whether utime exists and is declared... yes
checking for clock_gettime in -lrt... yes
checking whether clock_gettime exists and is declared... yes
checking whether timespec_get exists and is declared... yes
checking for putenv... yes
checking whether putenv is declared... yes
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checking whether glob exists and is declared... yes
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checking whether isfinite is declared... yes
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checking whether you have IEEE 754 floating-point arithmetic... yes
checking whether putenv("FOO") can unset an environment variable... yes
checking whether putenv("FOO=") can unset an environment variable... no
checking for nl_langinfo and CODESET... yes
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checking for strncasecmp... yes
checking whether mkdtemp is declared... yes
checking whether strdup is declared... yes
checking whether strncasecmp is declared... yes
checking for library containing connect... none required
checking for library containing gethostbyname... none required
checking for library containing xdr_string... none required
checking for __setfpucw... no
checking for working calloc... yes
checking for working isfinite... yes
checking for working log1p... yes
checking whether ftell works correctly on files opened for append... yes
checking for working sigaction... yes
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checking whether mktime works correctly outside 1902-2037... yes
checking complex.h usability... yes
checking complex.h presence... yes
checking for complex.h... yes
checking for double complex... yes
checking whether C99 double complex is supported... yes
checking whether cabs exists and is declared... yes
checking whether carg exists and is declared... yes
checking whether cexp exists and is declared... yes
checking whether clog exists and is declared... yes
checking whether csqrt exists and is declared... yes
checking whether cpow exists and is declared... yes
checking whether ccos exists and is declared... yes
checking whether csin exists and is declared... yes
checking whether ctan exists and is declared... yes
checking whether cacos exists and is declared... yes
checking whether casin exists and is declared... yes
checking whether catan exists and is declared... yes
checking whether ccosh exists and is declared... yes
checking whether csinh exists and is declared... yes
checking whether ctanh exists and is declared... yes
checking whether 'struct tm' includes tm_zone... yes
checking whether 'struct tm' includes tm_gmtoff... yes
checking for cblas_cdotu_sub in vecLib framework... no
checking for dgemm_ in -lmkl_gf_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -lpthread... yes
checking whether double complex BLAS can be used... yes
checking whether the BLAS is complete... yes
checking for dpstrf_... yes
checking iconv.h usability... yes
checking iconv.h presence... yes
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checking whether iconv accepts "UTF-8", "latin1", "ASCII" and "UCS-*"... yes
checking for iconvlist... no
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         extern size_t iconv (iconv_t cd, char * *inbuf, size_t *inbytesleft, char * *outbuf, size_t *outbytesleft);
checking wchar.h usability... yes
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checking for X... libraries , headers
checking for gethostbyname... yes
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checking X11/Intrinsic.h usability... yes
checking X11/Intrinsic.h presence... yes
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checking for XtToolkitInitialize in -lXt... yes
using X11 ... yes
checking for KeySym... yes
checking X11/Xmu/Atoms.h usability... no
checking X11/Xmu/Atoms.h presence... no
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checking tcl.h usability... yes
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checking mmap support for zlib... yes
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checking for lzma_version_number in -llzma... yes
checking lzma.h usability... yes
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checking if lzma version >= 5.0.3... yes
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checking whether leap seconds are treated according to POSIX... yes
checking for inline... inline
checking for sys/time.h... (cached) yes
checking for stdlib.h... (cached) yes
checking for unistd.h... (cached) yes
checking for sys/param.h... (cached) yes
checking for struct stat.st_atim.tv_nsec... yes
checking whether struct stat.st_atim is of type struct timespec... yes
checking for setitimer... yes
checking for special C compiler options needed for large files... no
checking for _FILE_OFFSET_BITS value needed for large files... no
checking for _LARGEFILE_SOURCE value needed for large files... no
checking whether KERN_USRSTACK sysctl is supported... no
checking for visible __lib_stack_end... yes
checking for lpr... lpr
checking for paperconf... /usr/bin/paperconf
checking for x86_64-linux-gnu-gfortran... x86_64-linux-gnu-gfortran
checking whether we are using the GNU Fortran compiler... yes
checking whether x86_64-linux-gnu-gfortran accepts -g... yes
checking for x86_64-linux-gnu-gfortran... (cached) x86_64-linux-gnu-gfortran
checking whether we are using the GNU Fortran compiler... (cached) yes
checking whether x86_64-linux-gnu-gfortran accepts -g... (cached) yes
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... no
checking for x86_64-linux-gnu-gfortran option to produce PIC... -fPIC
checking if x86_64-linux-gnu-gfortran PIC flag -fPIC works... yes
checking if x86_64-linux-gnu-gfortran static flag -static works... yes
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checking whether the x86_64-linux-gnu-gfortran linker (xild) supports shared libraries... yes
checking dynamic linker characteristics... GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
checking for Fortran flag to compile .f90 files... none
checking for Fortran flag to compile .f95 files... none
checking for x86_64-linux-gnu-gfortran option to support OpenMP... -fopenmp
checking for recommended packages... yes
checking whether NLS is requested... yes

Configuring src/extra/intl directory
checking for a thread-safe mkdir -p... /bin/mkdir -p
checking whether we are using the GNU C Library 2 or newer... yes
checking for x86_64-linux-gnu-ranlib... (cached) x86_64-linux-gnu-ranlib
checking for simple visibility declarations... yes
checking for stdint.h... yes
checking for getpagesize... yes
checking for working mmap... yes
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checking for multithread API to use... none
checking argz.h usability... yes
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checking for argz_count... yes
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checking whether fgets_unlocked is declared... yes
checking for iconv... (cached) yes
checking for iconv declaration... (cached)
         extern size_t iconv (iconv_t cd, char * *inbuf, size_t *inbytesleft, char * *outbuf, size_t *outbytesleft);
checking for NL_LOCALE_NAME macro... yes
checking for bison... bison
checking version of bison... 3.0.2, ok
checking for long long int... yes
checking for long double... yes
checking for wchar_t... yes
checking for wint_t... yes
checking for intmax_t... yes
checking whether printf() supports POSIX/XSI format strings... yes
checking whether we are using the GNU C Library 2.1 or newer... yes
checking for stdint.h... (cached) yes
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checking stddef.h usability... yes
checking stddef.h presence... yes
checking for stddef.h... yes
checking for stdlib.h... (cached) yes
checking for string.h... (cached) yes
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checking for setlocale... yes
checking for snprintf... yes
checking for wcslen... yes
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checking whether getc_unlocked is declared... yes
checking for nl_langinfo and CODESET... (cached) yes
checking for LC_MESSAGES... yes
checking for shared library run path origin... done
checking for CFPreferencesCopyAppValue... (cached) no
checking for CFLocaleCopyCurrent... (cached) no
checking whether included gettext is requested... no
checking for GNU gettext in libc... yes
checking whether to use NLS... yes
checking where the gettext function comes from... libc
Finished configuring src/extra/intl directory

using as R_SHELL for scripts ... /bin/bash
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R is now configured for x86_64-pc-linux-gnu

  Source directory:          .
  Installation directory:    /usr/local

  C compiler:                icc -std=gnu99  -O3 -ipo -openmp -xHost -multiple-processes
  Fortran 77 compiler:       gfortran  -g -O2

  C++ compiler:              icpc  -O3 -ipo -openmp -xHost -multiple-processes
  C++ 11 compiler:           icpc  -std=c++11 -O3 -ipo -openmp -xHost -multiple-processes
  Fortran 90/95 compiler:    x86_64-linux-gnu-gfortran -g -O2
  Obj-C compiler:	     x86_64-linux-gnu-gcc

  Interfaces supported:      X11, tcltk
  External libraries:        readline, BLAS(generic), LAPACK(in blas), lzma
  Additional capabilities:   PNG, JPEG, TIFF, NLS, cairo
  Options enabled:           shared R library, R profiling

  Recommended packages:      yes

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make[1]: Leaving directory `/home/iwtcr/tmp/R-3.1.1/share'
make[1]: Entering directory `/home/iwtcr/tmp/R-3.1.1/src'
make[2]: Entering directory `/home/iwtcr/tmp/R-3.1.1/src/scripts'
creating src/scripts/R.fe
make[3]: Entering directory `/home/iwtcr/tmp/R-3.1.1/src/scripts'
make[3]: Leaving directory `/home/iwtcr/tmp/R-3.1.1/src/scripts'
make[2]: Leaving directory `/home/iwtcr/tmp/R-3.1.1/src/scripts'
make[2]: Entering directory `/home/iwtcr/tmp/R-3.1.1/src/include'
config.status: creating src/include/config.h
config.status: src/include/config.h is unchanged
make[3]: Entering directory `/home/iwtcr/tmp/R-3.1.1/src/include/R_ext'
make[3]: Leaving directory `/home/iwtcr/tmp/R-3.1.1/src/include/R_ext'
make[2]: Leaving directory `/home/iwtcr/tmp/R-3.1.1/src/include'
make[2]: Entering directory `/home/iwtcr/tmp/R-3.1.1/src/extra'
make[3]: Entering directory `/home/iwtcr/tmp/R-3.1.1/src/extra/bzip2'
making blocksort.d from blocksort.c
making bzlib.d from bzlib.c
making bzcompress.d from bzcompress.c
making crctable.d from crctable.c
making decompress.d from decompress.c
making huffman.d from huffman.c
making randtable.d from randtable.c
make[4]: Entering directory `/home/iwtcr/tmp/R-3.1.1/src/extra/bzip2'
icc -std=gnu99 -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes   -c blocksort.c -o blocksort.o
icc -std=gnu99 -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes   -c bzlib.c -o bzlib.o
icc -std=gnu99 -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes   -c bzcompress.c -o bzcompress.o
icc -std=gnu99 -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes   -c crctable.c -o crctable.o
icc -std=gnu99 -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes   -c decompress.c -o decompress.o
icc -std=gnu99 -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes   -c huffman.c -o huffman.o
icc -std=gnu99 -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes   -c randtable.c -o randtable.o
rm -f libbz2.a
xiar cr libbz2.a blocksort.o bzlib.o bzcompress.o crctable.o decompress.o huffman.o randtable.o
x86_64-linux-gnu-ranlib libbz2.a
make[4]: Leaving directory `/home/iwtcr/tmp/R-3.1.1/src/extra/bzip2'
make[3]: Leaving directory `/home/iwtcr/tmp/R-3.1.1/src/extra/bzip2'
make[3]: Entering directory `/home/iwtcr/tmp/R-3.1.1/src/extra/pcre'
make[4]: Entering directory `/home/iwtcr/tmp/R-3.1.1/src/extra/pcre'
making pcre_chartables.d from pcre_chartables.c
making pcre_compile.d from pcre_compile.c
making pcre_config.d from pcre_config.c
making pcre_exec.d from pcre_exec.c
making pcre_fullinfo.d from pcre_fullinfo.c
making pcre_get.d from pcre_get.c
making pcre_globals.d from pcre_globals.c
making pcre_jit_compile.d from pcre_jit_compile.c
making pcre_maketables.d from pcre_maketables.c
making pcre_newline.d from pcre_newline.c
making pcre_ord2utf8.d from pcre_ord2utf8.c
making pcre_refcount.d from pcre_refcount.c
making pcre_study.d from pcre_study.c
making pcre_tables.d from pcre_tables.c
making pcre_ucd.d from pcre_ucd.c
making pcre_valid_utf8.d from pcre_valid_utf8.c
making pcre_version.d from pcre_version.c
making pcre_xclass.d from pcre_xclass.c
make[4]: Leaving directory `/home/iwtcr/tmp/R-3.1.1/src/extra/pcre'
make[4]: Entering directory `/home/iwtcr/tmp/R-3.1.1/src/extra/pcre'
icc -std=gnu99 -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes   -c pcre_chartables.c -o pcre_chartables.o
icc -std=gnu99 -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes   -c pcre_compile.c -o pcre_compile.o
icc -std=gnu99 -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes   -c pcre_config.c -o pcre_config.o
icc -std=gnu99 -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes   -c pcre_exec.c -o pcre_exec.o
icc -std=gnu99 -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes   -c pcre_fullinfo.c -o pcre_fullinfo.o
icc -std=gnu99 -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes   -c pcre_get.c -o pcre_get.o
icc -std=gnu99 -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes   -c pcre_globals.c -o pcre_globals.o
icc -std=gnu99 -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes   -c pcre_jit_compile.c -o pcre_jit_compile.o
icc -std=gnu99 -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes   -c pcre_maketables.c -o pcre_maketables.o
icc -std=gnu99 -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes   -c pcre_newline.c -o pcre_newline.o
icc -std=gnu99 -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes   -c pcre_ord2utf8.c -o pcre_ord2utf8.o
icc -std=gnu99 -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes   -c pcre_refcount.c -o pcre_refcount.o
icc -std=gnu99 -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes   -c pcre_study.c -o pcre_study.o
icc -std=gnu99 -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes   -c pcre_tables.c -o pcre_tables.o
icc -std=gnu99 -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes   -c pcre_ucd.c -o pcre_ucd.o
icc -std=gnu99 -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes   -c pcre_valid_utf8.c -o pcre_valid_utf8.o
icc -std=gnu99 -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes   -c pcre_version.c -o pcre_version.o
icc -std=gnu99 -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes   -c pcre_xclass.c -o pcre_xclass.o
rm -f libpcre.a
xiar cr libpcre.a pcre_chartables.o pcre_compile.o pcre_config.o pcre_exec.o pcre_fullinfo.o pcre_get.o pcre_globals.o pcre_jit_compile.o pcre_maketables.o pcre_newline.o pcre_ord2utf8.o pcre_refcount.o pcre_study.o pcre_tables.o pcre_ucd.o pcre_valid_utf8.o pcre_version.o pcre_xclass.o
x86_64-linux-gnu-ranlib libpcre.a
make[4]: Leaving directory `/home/iwtcr/tmp/R-3.1.1/src/extra/pcre'
make[3]: Leaving directory `/home/iwtcr/tmp/R-3.1.1/src/extra/pcre'
make[3]: Entering directory `/home/iwtcr/tmp/R-3.1.1/src/extra/zlib'
making adler32.d from adler32.c
making compress.d from compress.c
making crc32.d from crc32.c
making deflate.d from deflate.c
making infback.d from infback.c
making inffast.d from inffast.c
making inflate.d from inflate.c
making inftrees.d from inftrees.c
making trees.d from trees.c
making uncompr.d from uncompr.c
making zutil.d from zutil.c
make[4]: Entering directory `/home/iwtcr/tmp/R-3.1.1/src/extra/zlib'
icc -std=gnu99 -I.  -DUSE_MMAP -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes   -c adler32.c -o adler32.o
icc -std=gnu99 -I.  -DUSE_MMAP -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes   -c compress.c -o compress.o
icc -std=gnu99 -I.  -DUSE_MMAP -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes   -c crc32.c -o crc32.o
icc -std=gnu99 -I.  -DUSE_MMAP -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes   -c deflate.c -o deflate.o
icc -std=gnu99 -I.  -DUSE_MMAP -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes   -c infback.c -o infback.o
icc -std=gnu99 -I.  -DUSE_MMAP -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes   -c inffast.c -o inffast.o
icc -std=gnu99 -I.  -DUSE_MMAP -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes   -c inflate.c -o inflate.o
icc -std=gnu99 -I.  -DUSE_MMAP -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes   -c inftrees.c -o inftrees.o
icc -std=gnu99 -I.  -DUSE_MMAP -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes   -c trees.c -o trees.o
icc -std=gnu99 -I.  -DUSE_MMAP -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes   -c uncompr.c -o uncompr.o
icc -std=gnu99 -I.  -DUSE_MMAP -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes   -c zutil.c -o zutil.o
rm -f libz.a
xiar cr libz.a adler32.o compress.o crc32.o deflate.o infback.o inffast.o inflate.o inftrees.o trees.o uncompr.o zutil.o
x86_64-linux-gnu-ranlib libz.a
make[4]: Leaving directory `/home/iwtcr/tmp/R-3.1.1/src/extra/zlib'
make[3]: Leaving directory `/home/iwtcr/tmp/R-3.1.1/src/extra/zlib'
make[3]: Entering directory `/home/iwtcr/tmp/R-3.1.1/src/extra/tre'
make[4]: Entering directory `/home/iwtcr/tmp/R-3.1.1/src/extra/tre'
making regcomp.d from regcomp.c
making regerror.d from regerror.c
making regexec.d from regexec.c
making tre-ast.d from tre-ast.c
making tre-compile.d from tre-compile.c
making tre-match-approx.d from tre-match-approx.c
making tre-match-backtrack.d from tre-match-backtrack.c
making tre-match-parallel.d from tre-match-parallel.c
making tre-mem.d from tre-mem.c
making tre-parse.d from tre-parse.c
making tre-stack.d from tre-stack.c
making xmalloc.d from xmalloc.c
make[4]: Leaving directory `/home/iwtcr/tmp/R-3.1.1/src/extra/tre'
make[4]: Entering directory `/home/iwtcr/tmp/R-3.1.1/src/extra/tre'
icc -std=gnu99 -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes   -c regcomp.c -o regcomp.o
icc -std=gnu99 -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes   -c regerror.c -o regerror.o
icc -std=gnu99 -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes   -c regexec.c -o regexec.o
icc -std=gnu99 -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes   -c tre-ast.c -o tre-ast.o
icc -std=gnu99 -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes   -c tre-compile.c -o tre-compile.o
icc -std=gnu99 -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes   -c tre-match-approx.c -o tre-match-approx.o
icc -std=gnu99 -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes   -c tre-match-backtrack.c -o tre-match-backtrack.o
icc -std=gnu99 -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes   -c tre-match-parallel.c -o tre-match-parallel.o
icc -std=gnu99 -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes   -c tre-mem.c -o tre-mem.o
icc -std=gnu99 -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes   -c tre-parse.c -o tre-parse.o
icc -std=gnu99 -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes   -c tre-stack.c -o tre-stack.o
icc -std=gnu99 -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes   -c xmalloc.c -o xmalloc.o
rm -f libtre.a
xiar cr libtre.a regcomp.o regerror.o regexec.o tre-ast.o tre-compile.o tre-match-approx.o tre-match-backtrack.o tre-match-parallel.o tre-mem.o tre-parse.o tre-stack.o xmalloc.o
x86_64-linux-gnu-ranlib libtre.a
make[4]: Leaving directory `/home/iwtcr/tmp/R-3.1.1/src/extra/tre'
make[3]: Leaving directory `/home/iwtcr/tmp/R-3.1.1/src/extra/tre'
make[2]: Leaving directory `/home/iwtcr/tmp/R-3.1.1/src/extra'
make[2]: Entering directory `/home/iwtcr/tmp/R-3.1.1/src/appl'
making integrate.d from integrate.c
making interv.d from interv.c
making maxcol.d from maxcol.c
making optim.d from optim.c
making pretty.d from pretty.c
making uncmin.d from uncmin.c
make[3]: Entering directory `/home/iwtcr/tmp/R-3.1.1/src/appl'
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c integrate.c -o integrate.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c interv.c -o interv.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c maxcol.c -o maxcol.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c optim.c -o optim.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c pretty.c -o pretty.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c uncmin.c -o uncmin.o
gfortran  -fopenmp -fpic  -g -O2  -c dchdc.f -o dchdc.o
gfortran  -fopenmp -fpic  -g -O2  -c dpbfa.f -o dpbfa.o
gfortran  -fopenmp -fpic  -g -O2  -c dpbsl.f -o dpbsl.o
gfortran  -fopenmp -fpic  -g -O2  -c dpoco.f -o dpoco.o
gfortran  -fopenmp -fpic  -g -O2  -c dpodi.f -o dpodi.o
gfortran  -fopenmp -fpic  -g -O2  -c dpofa.f -o dpofa.o
gfortran  -fopenmp -fpic  -g -O2  -c dposl.f -o dposl.o
gfortran  -fopenmp -fpic  -g -O2  -c dqrdc.f -o dqrdc.o
gfortran  -fopenmp -fpic  -g -O2  -c dqrdc2.f -o dqrdc2.o
gfortran  -fopenmp -fpic  -g -O2  -c dqrls.f -o dqrls.o
gfortran  -fopenmp -fpic  -g -O2  -c dqrsl.f -o dqrsl.o
gfortran  -fopenmp -fpic  -g -O2  -c dqrutl.f -o dqrutl.o
gfortran  -fopenmp -fpic  -g -O2  -c dsvdc.f -o dsvdc.o
gfortran  -fopenmp -fpic  -g -O2  -c dtrco.f -o dtrco.o
gfortran  -fopenmp -fpic  -g -O2  -c dtrsl.f -o dtrsl.o
rm -f libappl.a
xiar cr libappl.a integrate.o interv.o maxcol.o optim.o pretty.o uncmin.o dchdc.o dpbfa.o dpbsl.o dpoco.o dpodi.o dpofa.o dposl.o dqrdc.o dqrdc2.o dqrls.o dqrsl.o dqrutl.o dsvdc.o dtrco.o dtrsl.o
x86_64-linux-gnu-ranlib libappl.a
make[3]: Leaving directory `/home/iwtcr/tmp/R-3.1.1/src/appl'
make[2]: Leaving directory `/home/iwtcr/tmp/R-3.1.1/src/appl'
make[2]: Entering directory `/home/iwtcr/tmp/R-3.1.1/src/nmath'
making mlutils.d from mlutils.c
making d1mach.d from d1mach.c
making i1mach.d from i1mach.c
making fmax2.d from fmax2.c
making fmin2.d from fmin2.c
making fprec.d from fprec.c
making fround.d from fround.c
making ftrunc.d from ftrunc.c
making sign.d from sign.c
making fsign.d from fsign.c
making imax2.d from imax2.c
making imin2.d from imin2.c
making chebyshev.d from chebyshev.c
making log1p.d from log1p.c
making expm1.d from expm1.c
making lgammacor.d from lgammacor.c
making gammalims.d from gammalims.c
making stirlerr.d from stirlerr.c
making bd0.d from bd0.c
making gamma.d from gamma.c
making lgamma.d from lgamma.c
making gamma_cody.d from gamma_cody.c
making beta.d from beta.c
making lbeta.d from lbeta.c
making polygamma.d from polygamma.c
making cospi.d from cospi.c
making bessel_i.d from bessel_i.c
making bessel_j.d from bessel_j.c
making bessel_k.d from bessel_k.c
making bessel_y.d from bessel_y.c
making choose.d from choose.c
making snorm.d from snorm.c
making sexp.d from sexp.c
making dgamma.d from dgamma.c
making pgamma.d from pgamma.c
making qgamma.d from qgamma.c
making rgamma.d from rgamma.c
making dbeta.d from dbeta.c
making pbeta.d from pbeta.c
making qbeta.d from qbeta.c
making rbeta.d from rbeta.c
making dunif.d from dunif.c
making punif.d from punif.c
making qunif.d from qunif.c
making runif.d from runif.c
making dnorm.d from dnorm.c
making pnorm.d from pnorm.c
making qnorm.d from qnorm.c
making rnorm.d from rnorm.c
making dlnorm.d from dlnorm.c
making plnorm.d from plnorm.c
making qlnorm.d from qlnorm.c
making rlnorm.d from rlnorm.c
making df.d from df.c
making pf.d from pf.c
making qf.d from qf.c
making rf.d from rf.c
making dnf.d from dnf.c
making dt.d from dt.c
making pt.d from pt.c
making qt.d from qt.c
making rt.d from rt.c
making dnt.d from dnt.c
making dchisq.d from dchisq.c
making pchisq.d from pchisq.c
making qchisq.d from qchisq.c
making rchisq.d from rchisq.c
making rnchisq.d from rnchisq.c
making dbinom.d from dbinom.c
making pbinom.d from pbinom.c
making qbinom.d from qbinom.c
making rbinom.d from rbinom.c
making rmultinom.d from rmultinom.c
making dcauchy.d from dcauchy.c
making pcauchy.d from pcauchy.c
making qcauchy.d from qcauchy.c
making rcauchy.d from rcauchy.c
making dexp.d from dexp.c
making pexp.d from pexp.c
making qexp.d from qexp.c
making rexp.d from rexp.c
making dgeom.d from dgeom.c
making pgeom.d from pgeom.c
making qgeom.d from qgeom.c
making rgeom.d from rgeom.c
making dhyper.d from dhyper.c
making phyper.d from phyper.c
making qhyper.d from qhyper.c
making rhyper.d from rhyper.c
making dnbinom.d from dnbinom.c
making pnbinom.d from pnbinom.c
making qnbinom.d from qnbinom.c
making rnbinom.d from rnbinom.c
making dpois.d from dpois.c
making ppois.d from ppois.c
making qpois.d from qpois.c
making rpois.d from rpois.c
making dweibull.d from dweibull.c
making pweibull.d from pweibull.c
making qweibull.d from qweibull.c
making rweibull.d from rweibull.c
making dlogis.d from dlogis.c
making plogis.d from plogis.c
making qlogis.d from qlogis.c
making rlogis.d from rlogis.c
making dnchisq.d from dnchisq.c
making pnchisq.d from pnchisq.c
making qnchisq.d from qnchisq.c
making dnbeta.d from dnbeta.c
making pnbeta.d from pnbeta.c
making qnbeta.d from qnbeta.c
making pnf.d from pnf.c
making pnt.d from pnt.c
making qnf.d from qnf.c
making qnt.d from qnt.c
making ptukey.d from ptukey.c
making qtukey.d from qtukey.c
making toms708.d from toms708.c
making wilcox.d from wilcox.c
making signrank.d from signrank.c
make[3]: Entering directory `/home/iwtcr/tmp/R-3.1.1/src/nmath'
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c mlutils.c -o mlutils.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c d1mach.c -o d1mach.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c i1mach.c -o i1mach.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c fmax2.c -o fmax2.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c fmin2.c -o fmin2.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c fprec.c -o fprec.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c fround.c -o fround.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c ftrunc.c -o ftrunc.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c sign.c -o sign.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c fsign.c -o fsign.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c imax2.c -o imax2.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c imin2.c -o imin2.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c chebyshev.c -o chebyshev.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c log1p.c -o log1p.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c expm1.c -o expm1.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c lgammacor.c -o lgammacor.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c gammalims.c -o gammalims.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c stirlerr.c -o stirlerr.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c bd0.c -o bd0.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c gamma.c -o gamma.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c lgamma.c -o lgamma.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c gamma_cody.c -o gamma_cody.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c beta.c -o beta.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c lbeta.c -o lbeta.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c polygamma.c -o polygamma.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c cospi.c -o cospi.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c bessel_i.c -o bessel_i.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c bessel_j.c -o bessel_j.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c bessel_k.c -o bessel_k.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c bessel_y.c -o bessel_y.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c choose.c -o choose.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c snorm.c -o snorm.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c sexp.c -o sexp.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c dgamma.c -o dgamma.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c pgamma.c -o pgamma.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c qgamma.c -o qgamma.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c rgamma.c -o rgamma.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c dbeta.c -o dbeta.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c pbeta.c -o pbeta.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c qbeta.c -o qbeta.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c rbeta.c -o rbeta.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c dunif.c -o dunif.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c punif.c -o punif.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c qunif.c -o qunif.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c runif.c -o runif.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c dnorm.c -o dnorm.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c pnorm.c -o pnorm.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c qnorm.c -o qnorm.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c rnorm.c -o rnorm.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c dlnorm.c -o dlnorm.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c plnorm.c -o plnorm.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c qlnorm.c -o qlnorm.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c rlnorm.c -o rlnorm.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c df.c -o df.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c pf.c -o pf.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c qf.c -o qf.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c rf.c -o rf.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c dnf.c -o dnf.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c dt.c -o dt.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c pt.c -o pt.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c qt.c -o qt.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c rt.c -o rt.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c dnt.c -o dnt.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c dchisq.c -o dchisq.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c pchisq.c -o pchisq.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c qchisq.c -o qchisq.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c rchisq.c -o rchisq.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c rnchisq.c -o rnchisq.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c dbinom.c -o dbinom.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c pbinom.c -o pbinom.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c qbinom.c -o qbinom.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c rbinom.c -o rbinom.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c rmultinom.c -o rmultinom.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c dcauchy.c -o dcauchy.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c pcauchy.c -o pcauchy.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c qcauchy.c -o qcauchy.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c rcauchy.c -o rcauchy.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c dexp.c -o dexp.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c pexp.c -o pexp.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c qexp.c -o qexp.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c rexp.c -o rexp.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c dgeom.c -o dgeom.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c pgeom.c -o pgeom.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c qgeom.c -o qgeom.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c rgeom.c -o rgeom.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c dhyper.c -o dhyper.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c phyper.c -o phyper.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c qhyper.c -o qhyper.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c rhyper.c -o rhyper.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c dnbinom.c -o dnbinom.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c pnbinom.c -o pnbinom.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c qnbinom.c -o qnbinom.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c rnbinom.c -o rnbinom.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c dpois.c -o dpois.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c ppois.c -o ppois.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c qpois.c -o qpois.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c rpois.c -o rpois.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c dweibull.c -o dweibull.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c pweibull.c -o pweibull.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c qweibull.c -o qweibull.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c rweibull.c -o rweibull.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c dlogis.c -o dlogis.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c plogis.c -o plogis.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c qlogis.c -o qlogis.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c rlogis.c -o rlogis.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c dnchisq.c -o dnchisq.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c pnchisq.c -o pnchisq.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c qnchisq.c -o qnchisq.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c dnbeta.c -o dnbeta.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c pnbeta.c -o pnbeta.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c qnbeta.c -o qnbeta.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c pnf.c -o pnf.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c pnt.c -o pnt.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c qnf.c -o qnf.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c qnt.c -o qnt.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c ptukey.c -o ptukey.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c qtukey.c -o qtukey.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c toms708.c -o toms708.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c wilcox.c -o wilcox.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c signrank.c -o signrank.o
rm -rf libnmath.a
xiar cr libnmath.a mlutils.o d1mach.o i1mach.o fmax2.o fmin2.o fprec.o fround.o ftrunc.o sign.o fsign.o imax2.o imin2.o chebyshev.o log1p.o expm1.o lgammacor.o gammalims.o stirlerr.o bd0.o gamma.o lgamma.o gamma_cody.o beta.o lbeta.o polygamma.o cospi.o bessel_i.o bessel_j.o bessel_k.o bessel_y.o choose.o snorm.o sexp.o dgamma.o pgamma.o qgamma.o rgamma.o dbeta.o pbeta.o qbeta.o rbeta.o dunif.o punif.o qunif.o runif.o dnorm.o pnorm.o qnorm.o rnorm.o dlnorm.o plnorm.o qlnorm.o rlnorm.o df.o pf.o qf.o rf.o dnf.o dt.o pt.o qt.o rt.o dnt.o dchisq.o pchisq.o qchisq.o rchisq.o rnchisq.o dbinom.o pbinom.o qbinom.o rbinom.o rmultinom.o dcauchy.o pcauchy.o qcauchy.o rcauchy.o dexp.o pexp.o qexp.o rexp.o dgeom.o pgeom.o qgeom.o rgeom.o dhyper.o phyper.o qhyper.o rhyper.o dnbinom.o pnbinom.o qnbinom.o rnbinom.o dpois.o ppois.o qpois.o rpois.o dweibull.o pweibull.o qweibull.o rweibull.o dlogis.o plogis.o qlogis.o rlogis.o dnchisq.o pnchisq.o qnchisq.o dnbeta.o pnbeta.o qnbeta.o pnf.o pnt.o qnf.o qnt.o ptukey.o qtukey.o toms708.o wilcox.o signrank.o
x86_64-linux-gnu-ranlib libnmath.a
make[3]: Leaving directory `/home/iwtcr/tmp/R-3.1.1/src/nmath'
make[2]: Leaving directory `/home/iwtcr/tmp/R-3.1.1/src/nmath'
make[2]: Entering directory `/home/iwtcr/tmp/R-3.1.1/src/unix'
config.status: creating src/unix/Makefile
make[2]: Leaving directory `/home/iwtcr/tmp/R-3.1.1/src/unix'
make[2]: Entering directory `/home/iwtcr/tmp/R-3.1.1/src/unix'
making Rembedded.d from Rembedded.c
making dynload.d from dynload.c
making system.d from system.c
making sys-unix.d from sys-unix.c
making sys-std.d from sys-std.c
making X11.d from X11.c
make[3]: Entering directory `/home/iwtcr/tmp/R-3.1.1/src/unix'
icc -std=gnu99 -I. -I../../src/include -I../../src/include  -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c Rembedded.c -o Rembedded.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include  -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c dynload.c -o dynload.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include  -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c system.c -o system.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include  -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c sys-unix.c -o sys-unix.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include  -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c sys-std.c -o sys-std.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include  -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c X11.c -o X11.o
rm -rf libunix.a
xiar cr libunix.a Rembedded.o dynload.o system.o sys-unix.o sys-std.o X11.o
x86_64-linux-gnu-ranlib libunix.a
make[3]: Leaving directory `/home/iwtcr/tmp/R-3.1.1/src/unix'
make[3]: Entering directory `/home/iwtcr/tmp/R-3.1.1/src/unix'
icc -std=gnu99 -I. -I../../src/include -I../../src/include  -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -L/usr/local/lib -DR_HOME='"/home/iwtcr/tmp/R-3.1.1"' \
	  -o Rscript ./Rscript.c
make[3]: Leaving directory `/home/iwtcr/tmp/R-3.1.1/src/unix'
make[2]: Leaving directory `/home/iwtcr/tmp/R-3.1.1/src/unix'
make[2]: Entering directory `/home/iwtcr/tmp/R-3.1.1/src/main'
config.status: creating src/main/Makefile
make[2]: Leaving directory `/home/iwtcr/tmp/R-3.1.1/src/main'
make[2]: Entering directory `/home/iwtcr/tmp/R-3.1.1/src/main'
making CommandLineArgs.d from CommandLineArgs.c
making Rdynload.d from Rdynload.c
making Renviron.d from Renviron.c
making RNG.d from RNG.c
making agrep.d from agrep.c
making apply.d from apply.c
making arithmetic.d from arithmetic.c
making array.d from array.c
making attrib.d from attrib.c
making bind.d from bind.c
making builtin.d from builtin.c
making character.d from character.c
making coerce.d from coerce.c
making colors.d from colors.c
making complex.d from complex.c
making connections.d from connections.c
making context.d from context.c
making cum.d from cum.c
making dcf.d from dcf.c
making datetime.d from datetime.c
making debug.d from debug.c
making deparse.d from deparse.c
making devices.d from devices.c
making dotcode.d from dotcode.c
making dounzip.d from dounzip.c
making dstruct.d from dstruct.c
making duplicate.d from duplicate.c
making edit.d from edit.c
making engine.d from engine.c
making envir.d from envir.c
making errors.d from errors.c
making eval.d from eval.c
making format.d from format.c
making gevents.d from gevents.c
making gram.d from gram.c
making gram-ex.d from gram-ex.c
making graphics.d from graphics.c
making grep.d from grep.c
making identical.d from identical.c
making inlined.d from inlined.c
making inspect.d from inspect.c
making internet.d from internet.c
making iosupport.d from iosupport.c
making lapack.d from lapack.c
making list.d from list.c
making localecharset.d from localecharset.c
making logic.d from logic.c
making main.d from main.c
making mapply.d from mapply.c
making match.d from match.c
making memory.d from memory.c
making names.d from names.c
making objects.d from objects.c
making options.d from options.c
making paste.d from paste.c
making platform.d from platform.c
making plot.d from plot.c
making plot3d.d from plot3d.c
making plotmath.d from plotmath.c
making print.d from print.c
making printarray.d from printarray.c
making printvector.d from printvector.c
making printutils.d from printutils.c
making qsort.d from qsort.c
making random.d from random.c
making raw.d from raw.c
making registration.d from registration.c
making relop.d from relop.c
making rlocale.d from rlocale.c
making saveload.d from saveload.c
making scan.d from scan.c
making seq.d from seq.c
making serialize.d from serialize.c
making sort.d from sort.c
making source.d from source.c
making split.d from split.c
making sprintf.d from sprintf.c
making startup.d from startup.c
making subassign.d from subassign.c
making subscript.d from subscript.c
making subset.d from subset.c
making summary.d from summary.c
making sysutils.d from sysutils.c
making times.d from times.c
making unique.d from unique.c
making util.d from util.c
making version.d from version.c
making vfonts.d from vfonts.c
making Rmain.d from Rmain.c
making alloca.d from alloca.c
making mkdtemp.d from mkdtemp.c
making strdup.d from strdup.c
making strncasecmp.d from strncasecmp.c
make[3]: Entering directory `/home/iwtcr/tmp/R-3.1.1/src/main'
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c CommandLineArgs.c -o CommandLineArgs.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c Rdynload.c -o Rdynload.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c Renviron.c -o Renviron.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c RNG.c -o RNG.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c agrep.c -o agrep.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c apply.c -o apply.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c arithmetic.c -o arithmetic.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c array.c -o array.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c attrib.c -o attrib.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c bind.c -o bind.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c builtin.c -o builtin.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c character.c -o character.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c coerce.c -o coerce.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c colors.c -o colors.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c complex.c -o complex.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c connections.c -o connections.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c context.c -o context.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c cum.c -o cum.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c dcf.c -o dcf.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c datetime.c -o datetime.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c debug.c -o debug.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c deparse.c -o deparse.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c devices.c -o devices.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c dotcode.c -o dotcode.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c dounzip.c -o dounzip.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c dstruct.c -o dstruct.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c duplicate.c -o duplicate.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c edit.c -o edit.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c engine.c -o engine.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c envir.c -o envir.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c errors.c -o errors.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c eval.c -o eval.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c format.c -o format.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c gevents.c -o gevents.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c gram.c -o gram.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c gram-ex.c -o gram-ex.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c graphics.c -o graphics.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c grep.c -o grep.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c identical.c -o identical.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c inlined.c -o inlined.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c inspect.c -o inspect.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c internet.c -o internet.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c iosupport.c -o iosupport.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c lapack.c -o lapack.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c list.c -o list.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c localecharset.c -o localecharset.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c logic.c -o logic.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c main.c -o main.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c mapply.c -o mapply.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c match.c -o match.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c memory.c -o memory.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c names.c -o names.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c objects.c -o objects.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c options.c -o options.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c paste.c -o paste.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c platform.c -o platform.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c plot.c -o plot.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c plot3d.c -o plot3d.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c plotmath.c -o plotmath.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c print.c -o print.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c printarray.c -o printarray.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c printvector.c -o printvector.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c printutils.c -o printutils.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c qsort.c -o qsort.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c random.c -o random.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c raw.c -o raw.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c registration.c -o registration.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c relop.c -o relop.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c rlocale.c -o rlocale.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c saveload.c -o saveload.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c scan.c -o scan.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c seq.c -o seq.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c serialize.c -o serialize.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c sort.c -o sort.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c source.c -o source.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c split.c -o split.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c sprintf.c -o sprintf.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c startup.c -o startup.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c subassign.c -o subassign.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c subscript.c -o subscript.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c subset.c -o subset.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c summary.c -o summary.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c sysutils.c -o sysutils.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c times.c -o times.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c unique.c -o unique.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c util.c -o util.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c version.c -o version.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c vfonts.c -o vfonts.o
gfortran  -fopenmp -fpic  -g -O2  -c xxxpr.f -o xxxpr.o
icc -std=gnu99 -shared  -L/usr/local/lib  -o libR.so CommandLineArgs.o Rdynload.o Renviron.o RNG.o agrep.o apply.o arithmetic.o array.o attrib.o bind.o builtin.o character.o coerce.o colors.o complex.o connections.o context.o cum.o dcf.o datetime.o debug.o deparse.o devices.o dotcode.o dounzip.o dstruct.o duplicate.o edit.o engine.o envir.o errors.o eval.o format.o gevents.o gram.o gram-ex.o graphics.o grep.o identical.o inlined.o inspect.o internet.o iosupport.o lapack.o list.o localecharset.o logic.o main.o mapply.o match.o memory.o names.o objects.o options.o paste.o platform.o plot.o plot3d.o plotmath.o print.o printarray.o printvector.o printutils.o qsort.o random.o raw.o registration.o relop.o rlocale.o saveload.o scan.o seq.o serialize.o sort.o source.o split.o sprintf.o startup.o subassign.o subscript.o subset.o summary.o sysutils.o times.o unique.o util.o version.o vfonts.o xxxpr.o   `ls ../unix/*.o ../appl/*.o ../nmath/*.o` ../extra/zlib/libz.a ../extra/bzip2/libbz2.a ../extra/pcre/libpcre.a ../extra/tre/libtre.a     -lmkl_gf_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -lpthread -lgfortran -lm -lquadmath   -lreadline  -llzma -lrt -ldl -lm
make[4]: Entering directory `/home/iwtcr/tmp/R-3.1.1/src/main'
mkdir -p -- /home/iwtcr/tmp/R-3.1.1/lib
make[4]: Leaving directory `/home/iwtcr/tmp/R-3.1.1/src/main'
make[3]: Leaving directory `/home/iwtcr/tmp/R-3.1.1/src/main'
make[3]: Entering directory `/home/iwtcr/tmp/R-3.1.1/src/main'
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c Rmain.c -o Rmain.o
icc -std=gnu99 -Wl,--export-dynamic   -L/usr/local/lib -o R.bin Rmain.o  -L../../lib -lR
make[3]: Leaving directory `/home/iwtcr/tmp/R-3.1.1/src/main'
make[2]: Leaving directory `/home/iwtcr/tmp/R-3.1.1/src/main'
make[1]: Leaving directory `/home/iwtcr/tmp/R-3.1.1/src'

###############################################################################################

############################ [ make error log (with --enable-R-shlib) ] ################################

ld: /tmp/ipo_iccUpPSPh.o: undefined reference to symbol '__kmpc_end@@VERSION'

/opt/intel/composer_xe_2013_sp1.3.174/compiler/lib/intel64/libiomp5.so: error adding symbols: DSO missing from command line
make[3]: *** [R.bin] Error 1
make[2]: *** [R] Error 2
make[1]: *** [R] Error 1
make: *** [R] Error 1

###############################################################################################

############################ [ ./configure output (without --enable-R-shlib) ] ############################

checking build system type... x86_64-pc-linux-gnu

checking host system type... x86_64-pc-linux-gnu
loading site script './config.site'
loading build-specific script './config.site'
checking for pwd... /bin/pwd
checking whether builddir is srcdir... yes
checking for working aclocal... found
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checking for gawk... no
checking for mawk... mawk
checking whether ln -s works... yes
checking for bison... bison -y
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checking for a BSD-compatible install... /usr/bin/install -c
checking for sed... /bin/sed
checking for which... /usr/bin/which
checking for less... /usr/bin/less
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checking whether makeinfo version is at least 4.7... yes
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checking for latex inconsolata package... found zi4.sty
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using default browser ... /usr/bin/firefox
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checking for pkg-config... /usr/bin/pkg-config
checking for x86_64-linux-gnu-gcc... icc
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables...
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether icc accepts -g... yes
checking for icc option to accept ISO C89... none needed
checking how to run the C preprocessor... icc -E
checking for grep that handles long lines and -e... /bin/grep
checking for egrep... /bin/grep -E
checking whether icc needs -traditional... no
checking how to run the C preprocessor... icc -E
checking for gfortran... gfortran
checking for x86_64-linux-gnu-g77... (cached) gfortran
checking whether we are using the GNU Fortran 77 compiler... yes
checking whether gfortran accepts -g... yes
checking whether we are using the GNU C++ compiler... yes
checking whether icpc accepts -g... yes
checking how to run the C++ preprocessor... icpc -E
checking whether __attribute__((visibility())) is supported... yes
checking whether icc accepts -fvisibility... yes
checking whether gfortran accepts -fvisibility... yes
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking minix/config.h usability... no
checking minix/config.h presence... no
checking for minix/config.h... no
checking whether it is safe to define __EXTENSIONS__... yes
checking for x86_64-linux-gnu-gcc... x86_64-linux-gnu-gcc
checking whether we are using the GNU Objective C compiler... no
checking whether x86_64-linux-gnu-gcc accepts -g... no
checking for Objective C++ compiler... trying some possibilities
checking whether icpc can compile ObjC++... yes
icpc
checking for a sed that does not truncate output... (cached) /bin/sed
checking for fgrep... /bin/grep -F
checking for ld used by icc... xild
checking if the linker (xild) is GNU ld... yes
checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B
checking the name lister (/usr/bin/nm -B) interface... BSD nm
checking the maximum length of command line arguments... 1572864
checking whether the shell understands some XSI constructs... yes
checking whether the shell understands "+="... yes
checking for xild option to reload object files... -r
checking for x86_64-linux-gnu-objdump... x86_64-linux-gnu-objdump
checking how to recognize dependent libraries... pass_all
checking for x86_64-linux-gnu-ar... (cached) xiar
checking for x86_64-linux-gnu-strip... x86_64-linux-gnu-strip
checking for x86_64-linux-gnu-ranlib... x86_64-linux-gnu-ranlib
checking command to parse /usr/bin/nm -B output from icc object... failed
checking for dlfcn.h... yes
checking whether we are using the GNU C++ compiler... (cached) yes
checking whether icpc accepts -g... (cached) yes
checking how to run the C++ preprocessor... icpc -E
checking for x86_64-linux-gnu-g77... (cached) gfortran
checking whether we are using the GNU Fortran 77 compiler... (cached) yes
checking whether gfortran accepts -g... (cached) yes
checking for objdir... .libs
checking if icc supports -fno-rtti -fno-exceptions... yes
checking for icc option to produce PIC... -fPIC -DPIC
checking if icc PIC flag -fPIC -DPIC works... yes
checking if icc static flag -static works... yes
checking if icc supports -c -o file.o... yes
checking if icc supports -c -o file.o... (cached) yes
checking whether the icc linker (xild) supports shared libraries... yes
checking whether -lc should be explicitly linked in... no
checking dynamic linker characteristics... GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
checking whether stripping libraries is possible... yes
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... no
checking for ld used by icpc... xild
checking if the linker (xild) is GNU ld... yes
checking whether the icpc linker (xild) supports shared libraries... yes
checking for icpc option to produce PIC... -fPIC -DPIC
checking if icpc PIC flag -fPIC -DPIC works... yes
checking if icpc static flag -static works... yes
checking if icpc supports -c -o file.o... yes
checking if icpc supports -c -o file.o... (cached) yes
checking whether the icpc linker (xild) supports shared libraries... yes
checking dynamic linker characteristics... GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... no
checking for gfortran option to produce PIC... -fPIC
checking if gfortran PIC flag -fPIC works... yes
checking if gfortran static flag -static works... yes
checking if gfortran supports -c -o file.o... yes
checking if gfortran supports -c -o file.o... (cached) yes
checking whether the gfortran linker (xild) supports shared libraries... yes
checking dynamic linker characteristics... GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
checking for cos in -lm... yes
checking for sin in -lm... yes
checking for dlopen in -ldl... yes
checking readline/history.h usability... yes
checking readline/history.h presence... yes
checking for readline/history.h... yes
checking readline/readline.h usability... yes
checking readline/readline.h presence... yes
checking for readline/readline.h... yes
checking for rl_callback_read_char in -lreadline... yes
checking for history_truncate_file... yes
checking whether rl_completion_matches exists and is declared... yes
checking for ANSI C header files... (cached) yes
checking for dirent.h that defines DIR... yes
checking for library containing opendir... none required
checking for sys/wait.h that is POSIX.1 compatible... yes
checking arpa/inet.h usability... yes
checking arpa/inet.h presence... yes
checking for arpa/inet.h... yes
checking dl.h usability... no
checking dl.h presence... no
checking for dl.h... no
checking for dlfcn.h... (cached) yes
checking elf.h usability... yes
checking elf.h presence... yes
checking for elf.h... yes
checking fcntl.h usability... yes
checking fcntl.h presence... yes
checking for fcntl.h... yes
checking floatingpoint.h usability... no
checking floatingpoint.h presence... no
checking for floatingpoint.h... no
checking fpu_control.h usability... yes
checking fpu_control.h presence... yes
checking for fpu_control.h... yes
checking glob.h usability... yes
checking glob.h presence... yes
checking for glob.h... yes
checking grp.h usability... yes
checking grp.h presence... yes
checking for grp.h... yes
checking langinfo.h usability... yes
checking langinfo.h presence... yes
checking for langinfo.h... yes
checking netdb.h usability... yes
checking netdb.h presence... yes
checking for netdb.h... yes
checking netinet/in.h usability... yes
checking netinet/in.h presence... yes
checking for netinet/in.h... yes
checking pwd.h usability... yes
checking pwd.h presence... yes
checking for pwd.h... yes
checking sched.h usability... yes
checking sched.h presence... yes
checking for sched.h... yes
checking for strings.h... (cached) yes
checking sys/param.h usability... yes
checking sys/param.h presence... yes
checking for sys/param.h... yes
checking sys/resource.h usability... yes
checking sys/resource.h presence... yes
checking for sys/resource.h... yes
checking sys/select.h usability... yes
checking sys/select.h presence... yes
checking for sys/select.h... yes
checking sys/socket.h usability... yes
checking sys/socket.h presence... yes
checking for sys/socket.h... yes
checking for sys/stat.h... (cached) yes
checking sys/time.h usability... yes
checking sys/time.h presence... yes
checking for sys/time.h... yes
checking sys/times.h usability... yes
checking sys/times.h presence... yes
checking for sys/times.h... yes
checking sys/utsname.h usability... yes
checking sys/utsname.h presence... yes
checking for sys/utsname.h... yes
checking for unistd.h... (cached) yes
checking utime.h usability... yes
checking utime.h presence... yes
checking for utime.h... yes
checking errno.h usability... yes
checking errno.h presence... yes
checking for errno.h... yes
checking for inttypes.h... (cached) yes
checking limits.h usability... yes
checking limits.h presence... yes
checking for limits.h... yes
checking locale.h usability... yes
checking locale.h presence... yes
checking for locale.h... yes
checking stdarg.h usability... yes
checking stdarg.h presence... yes
checking for stdarg.h... yes
checking stdbool.h usability... yes
checking stdbool.h presence... yes
checking for stdbool.h... yes
checking for stdint.h... (cached) yes
checking for string.h... (cached) yes
checking whether setjmp.h is POSIX.1 compatible... yes
checking whether sigsetjmp is declared... yes
checking whether siglongjmp is declared... yes
checking for GNU C library with version >= 2... yes
checking return type of signal handlers... void
checking for uint64_t... yes
checking for int64_t... yes
checking for int_fast64_t... yes
checking for pid_t... yes
checking for size_t... yes
checking whether SIZE_MAX is declared... yes
checking for blkcnt_t... yes
checking for type of socket length... socklen_t *
checking for stack_t... yes
checking for intptr_t... yes
checking for uintptr_t... yes
checking whether byte ordering is bigendian... no
checking for an ANSI C-conforming const... yes
checking for icc option to accept ISO C99... -std=gnu99
checking for icc -std=gnu99 option to accept ISO Standard C... (cached) -std=gnu99
checking for inline... inline
checking size of int... 4
checking size of long... 8
checking size of long long... 8
checking size of double... 8
checking size of size_t... 8
checking size of long double... 16
checking whether we can compute C Make dependencies... yes, using $(CC) -MM
checking whether icc -std=gnu99 supports -c -o FILE.lo... yes
checking for icc -std=gnu99 option to support OpenMP... none needed
checking how to get verbose linking output from gfortran... -v
checking for Fortran 77 libraries of gfortran...  -L/usr/local/lib -L/usr/lib/gcc/x86_64-linux-gnu/4.8 -L/usr/lib/gcc/x86_64-linux-gnu/4.8/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/4.8/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/opt/intel/composer_xe_2013_sp1.3.174/compiler/lib/intel64 -L/opt/intel/composer_xe_2013_sp1.3.174/ipp/../compiler/lib/intel64 -L/opt/intel/composer_xe_2013_sp1.3.174/ipp/lib/intel64 -L/opt/intel/composer_xe_2013_sp1.3.174/mkl/lib/intel64 -L/opt/intel/composer_xe_2013_sp1.3.174/tbb/lib/intel64/gcc4.4 -L/usr/lib/gcc/x86_64-linux-gnu/4.8/../../.. -lgfortran -lm -lquadmath
checking how to get verbose linking output from icc -std=gnu99... -v
checking for C libraries of icc -std=gnu99...  -L/usr/local/lib -L/opt/intel/composer_xe_2013_sp1.3.174/compiler/lib/intel64 -L/opt/intel/composer_xe_2013_sp1.3.174/ipp/../compiler/lib/intel64 -L/opt/intel/composer_xe_2013_sp1.3.174/ipp/lib/intel64 -L/opt/intel/composer_xe_2013_sp1.3.174/mkl/lib/intel64 -L/opt/intel/composer_xe_2013_sp1.3.174/tbb/lib/intel64/gcc4.4 -L/usr/lib/gcc/x86_64-linux-gnu/4.8/ -L/usr/lib/gcc/x86_64-linux-gnu/4.8/../../../x86_64-linux-gnu/ -L/usr/lib/gcc/x86_64-linux-gnu/4.8/../../../../lib/ -L/lib/x86_64-linux-gnu/ -L/lib/../lib64 -L/lib/../lib/ -L/usr/lib/x86_64-linux-gnu/ -L/usr/lib/../lib/ -L/opt/intel/composer_xe_2013_sp1.3.174/compiler/lib/intel64/ -L/opt/intel/composer_xe_2013_sp1.3.174/ipp/../compiler/lib/intel64/ -L/opt/intel/composer_xe_2013_sp1.3.174/ipp/lib/intel64/ -L/opt/intel/composer_xe_2013_sp1.3.174/mkl/lib/intel64/ -L/opt/intel/composer_xe_2013_sp1.3.174/tbb/lib/intel64/gcc4.4/ -L/usr/lib/gcc/x86_64-linux-gnu/4.8/../../../ -L/lib64 -L/lib/ -L/usr/lib -L/usr/lib/i386-linux-gnu -limf -lsvml -lirng -lm -lipgo -ldecimal -liomp5 -lcilkrts -lstdc++ -lgcc_s -lirc -lpthread -lirc_s -ldl
checking for dummy main to link with Fortran 77 libraries... none
checking for Fortran 77 name-mangling scheme... lower case, underscore, no extra underscore
checking whether gfortran appends underscores to external names... yes
checking whether gfortran appends extra underscores to external names... no
checking whether mixed C/Fortran code can be run... yes
checking whether gfortran and icc -std=gnu99 agree on int and double... yes
checking whether gfortran and icc -std=gnu99 agree on double complex... yes
checking for gfortran option to support OpenMP... -fopenmp
checking whether icpc accepts -M for generating dependencies... yes
checking for icpc option to support OpenMP... none needed
checking whether we can compute ObjC Make dependencies... no
checking for ObjC runtime library...
checking whether x86_64-linux-gnu-gcc accepts -fobjc-exceptions... no
checking whether C runtime needs -D__NO_MATH_INLINES... no
checking for xmkmf... no
checking whether icpc  supports C++11 features by default... no
checking whether icpc  supports C++11 features with -std=c++11... yes
checking for off_t... yes
checking for working alloca.h... yes
checking for alloca... yes
checking whether alloca is declared... yes
checking whether expm1 exists and is declared... yes
checking whether hypot exists and is declared... yes
checking whether log1p exists and is declared... yes
checking whether log1pl exists and is declared... yes
checking whether log2 exists and is declared... yes
checking whether log10 exists and is declared... yes
checking whether nearbyint exists and is declared... yes
checking whether nearbyintl exists and is declared... yes
checking whether powl exists and is declared... yes
checking whether rint exists and is declared... yes
checking whether rintl exists and is declared... yes
checking whether va_copy exists and is declared... yes
checking for isblank... yes
checking sunmath.h usability... no
checking sunmath.h presence... no
checking for sunmath.h... no
checking for cospi in -lsunmath... no
checking for atanpi... no
checking for atan2pi... no
checking for cospi... no
checking for exp10... yes
checking for pown... no
checking for sinpi... no
checking for tanpi... no
checking for fseeko... yes
checking for ftello... yes
checking for matherr... yes
checking whether fcntl exists and is declared... yes
checking whether getgrgid exists and is declared... yes
checking whether getpwuid exists and is declared... yes
checking whether kill exists and is declared... yes
checking whether sigaction exists and is declared... yes
checking whether sigaltstack exists and is declared... yes
checking whether sigemptyset exists and is declared... yes
checking whether fdopen exists and is declared... yes
checking whether popen exists and is declared... yes
checking whether setenv exists and is declared... yes
checking whether unsetenv exists and is declared... yes
checking whether getrlimit exists and is declared... yes
checking whether getrusage exists and is declared... yes
checking whether getpriority exists and is declared... yes
checking whether chmod exists and is declared... yes
checking whether mkfifo exists and is declared... yes
checking whether stat exists and is declared... yes
checking whether umask exists and is declared... yes
checking whether gettimeofday exists and is declared... yes
checking whether utimes exists and is declared... yes
checking whether times exists and is declared... yes
checking whether gmtime_r exists and is declared... yes
checking whether localtime_r exists and is declared... yes
checking whether nl_langinfo exists and is declared... yes
checking whether access exists and is declared... yes
checking whether chdir exists and is declared... yes
checking whether execv exists and is declared... yes
checking whether ftruncate exists and is declared... yes
checking whether getcwd exists and is declared... yes
checking whether geteuid exists and is declared... yes
checking whether getuid exists and is declared... yes
checking whether link exists and is declared... yes
checking whether readlink exists and is declared... yes
checking whether symlink exists and is declared... yes
checking whether sysconf exists and is declared... yes
checking whether sched_setaffinity exists and is declared... yes
checking whether sched_getaffinity exists and is declared... yes
checking whether utime exists and is declared... yes
checking for clock_gettime in -lrt... yes
checking whether clock_gettime exists and is declared... yes
checking whether timespec_get exists and is declared... yes
checking for putenv... yes
checking whether putenv is declared... yes
checking for vasprintf... yes
checking whether vasprintf is declared... yes
checking for mempcpy... yes
checking for realpath... yes
checking whether realpath is declared... yes
checking whether glob exists and is declared... yes
checking for isnan... yes
checking whether isfinite is declared... yes
checking whether isnan is declared... yes
checking whether you have IEEE 754 floating-point arithmetic... yes
checking whether putenv("FOO") can unset an environment variable... yes
checking whether putenv("FOO=") can unset an environment variable... no
checking for nl_langinfo and CODESET... yes
checking for mkdtemp... yes
checking for strdup... yes
checking for strncasecmp... yes
checking whether mkdtemp is declared... yes
checking whether strdup is declared... yes
checking whether strncasecmp is declared... yes
checking for library containing connect... none required
checking for library containing gethostbyname... none required
checking for library containing xdr_string... none required
checking for __setfpucw... no
checking for working calloc... yes
checking for working isfinite... yes
checking for working log1p... yes
checking whether ftell works correctly on files opened for append... yes
checking for working sigaction... yes
checking whether mktime sets errno... no
checking whether mktime works correctly outside 1902-2037... yes
checking complex.h usability... yes
checking complex.h presence... yes
checking for complex.h... yes
checking for double complex... yes
checking whether C99 double complex is supported... yes
checking whether cabs exists and is declared... yes
checking whether carg exists and is declared... yes
checking whether cexp exists and is declared... yes
checking whether clog exists and is declared... yes
checking whether csqrt exists and is declared... yes
checking whether cpow exists and is declared... yes
checking whether ccos exists and is declared... yes
checking whether csin exists and is declared... yes
checking whether ctan exists and is declared... yes
checking whether cacos exists and is declared... yes
checking whether casin exists and is declared... yes
checking whether catan exists and is declared... yes
checking whether ccosh exists and is declared... yes
checking whether csinh exists and is declared... yes
checking whether ctanh exists and is declared... yes
checking whether 'struct tm' includes tm_zone... yes
checking whether 'struct tm' includes tm_gmtoff... yes
checking for cblas_cdotu_sub in vecLib framework... no
checking for dgemm_ in -lmkl_gf_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -lpthread... yes
checking whether double complex BLAS can be used... yes
checking whether the BLAS is complete... yes
checking for dpstrf_... yes
checking iconv.h usability... yes
checking iconv.h presence... yes
checking for iconv.h... yes
checking for iconv... yes
checking whether iconv accepts "UTF-8", "latin1", "ASCII" and "UCS-*"... yes
checking for iconvlist... no
checking for iconv... yes
checking for iconv declaration...
         extern size_t iconv (iconv_t cd, char * *inbuf, size_t *inbytesleft, char * *outbuf, size_t *outbytesleft);
checking wchar.h usability... yes
checking wchar.h presence... yes
checking for wchar.h... yes
checking wctype.h usability... yes
checking wctype.h presence... yes
checking for wctype.h... yes
checking whether mbrtowc exists and is declared... yes
checking whether wcrtomb exists and is declared... yes
checking whether wcscoll exists and is declared... yes
checking whether wcsftime exists and is declared... yes
checking whether wcstod exists and is declared... yes
checking whether mbstowcs exists and is declared... yes
checking whether wcstombs exists and is declared... yes
checking whether wctrans exists and is declared... yes
checking whether iswblank exists and is declared... yes
checking whether wctype exists and is declared... yes
checking whether iswctype exists and is declared... yes
checking for wctrans_t... yes
checking for mbstate_t... yes
checking for ICU... no
checking for X... libraries , headers
checking for gethostbyname... yes
checking for connect... yes
checking for remove... yes
checking for shmat... yes
checking for IceConnectionNumber in -lICE... yes
checking X11/Intrinsic.h usability... yes
checking X11/Intrinsic.h presence... yes
checking for X11/Intrinsic.h... yes
checking for XtToolkitInitialize in -lXt... yes
using X11 ... yes
checking for KeySym... yes
checking X11/Xmu/Atoms.h usability... no
checking X11/Xmu/Atoms.h presence... no
checking for X11/Xmu/Atoms.h... no
checking whether pkg-config knows about cairo and pango... yes
checking whether cairo including pango is >= 1.2 and works... yes
checking for tclConfig.sh... no
checking for tclConfig.sh in library (sub)directories... /usr/lib/tcl8.5/tclConfig.sh
checking for tkConfig.sh... no
checking for tkConfig.sh in library (sub)directories... /usr/lib/tk8.5/tkConfig.sh
checking tcl.h usability... yes
checking tcl.h presence... yes
checking for tcl.h... yes
checking tk.h usability... yes
checking tk.h presence... yes
checking for tk.h... yes
checking whether compiling/linking Tcl/Tk code works... yes
checking for BSD networking... yes
checking if jpeglib version >= 6b... yes
checking for jpeg_destroy_compress in -ljpeg... yes
checking for main in -lz... yes
checking if libpng version >= 1.2.7... yes
checking for png_create_write_struct in -lpng... yes
checking tiffio.h usability... yes
checking tiffio.h presence... yes
checking for tiffio.h... yes
checking for TIFFOpen in -ltiff... yes
checking rpc/types.h usability... yes
checking rpc/types.h presence... yes
checking for rpc/types.h... yes
checking for rpc/xdr.h... yes
checking for XDR support... yes
checking whether zlib support needs to be compiled... yes
checking mmap support for zlib... yes
checking whether bzip2 support needs to be compiled... yes
checking for lzma_version_number in -llzma... yes
checking lzma.h usability... yes
checking lzma.h presence... yes
checking for lzma.h... yes
checking if lzma version >= 5.0.3... yes
checking whether PCRE support needs to be compiled... yes
checking whether leap seconds are treated according to POSIX... yes
checking for inline... inline
checking for sys/time.h... (cached) yes
checking for stdlib.h... (cached) yes
checking for unistd.h... (cached) yes
checking for sys/param.h... (cached) yes
checking for struct stat.st_atim.tv_nsec... yes
checking whether struct stat.st_atim is of type struct timespec... yes
checking for setitimer... yes
checking for special C compiler options needed for large files... no
checking for _FILE_OFFSET_BITS value needed for large files... no
checking for _LARGEFILE_SOURCE value needed for large files... no
checking whether KERN_USRSTACK sysctl is supported... no
checking for visible __lib_stack_end... yes
checking for lpr... lpr
checking for paperconf... /usr/bin/paperconf
checking for x86_64-linux-gnu-gfortran... x86_64-linux-gnu-gfortran
checking whether we are using the GNU Fortran compiler... yes
checking whether x86_64-linux-gnu-gfortran accepts -g... yes
checking for x86_64-linux-gnu-gfortran... (cached) x86_64-linux-gnu-gfortran
checking whether we are using the GNU Fortran compiler... (cached) yes
checking whether x86_64-linux-gnu-gfortran accepts -g... (cached) yes
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... no
checking for x86_64-linux-gnu-gfortran option to produce PIC... -fPIC
checking if x86_64-linux-gnu-gfortran PIC flag -fPIC works... yes
checking if x86_64-linux-gnu-gfortran static flag -static works... yes
checking if x86_64-linux-gnu-gfortran supports -c -o file.o... yes
checking if x86_64-linux-gnu-gfortran supports -c -o file.o... (cached) yes
checking whether the x86_64-linux-gnu-gfortran linker (xild) supports shared libraries... yes
checking dynamic linker characteristics... GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
checking for Fortran flag to compile .f90 files... none
checking for Fortran flag to compile .f95 files... none
checking for x86_64-linux-gnu-gfortran option to support OpenMP... -fopenmp
checking for recommended packages... yes
checking whether NLS is requested... yes

Configuring src/extra/intl directory
checking for a thread-safe mkdir -p... /bin/mkdir -p
checking whether we are using the GNU C Library 2 or newer... yes
checking for x86_64-linux-gnu-ranlib... (cached) x86_64-linux-gnu-ranlib
checking for simple visibility declarations... yes
checking for stdint.h... yes
checking for getpagesize... yes
checking for working mmap... yes
checking whether integer division by zero raises SIGFPE... yes
checking for inttypes.h... yes
checking for unsigned long long int... yes
checking for inttypes.h... (cached) yes
checking whether the inttypes.h PRIxNN macros are broken... no
checking whether imported symbols can be declared weak... yes
checking for multithread API to use... none
checking argz.h usability... yes
checking argz.h presence... yes
checking for argz.h... yes
checking for inttypes.h... (cached) yes
checking for limits.h... (cached) yes
checking for unistd.h... (cached) yes
checking for sys/param.h... (cached) yes
checking for getcwd... yes
checking for getegid... yes
checking for geteuid... yes
checking for getgid... yes
checking for getuid... yes
checking for mempcpy... (cached) yes
checking for munmap... yes
checking for stpcpy... yes
checking for strcasecmp... yes
checking for strdup... (cached) yes
checking for strtoul... yes
checking for tsearch... yes
checking for argz_count... yes
checking for argz_stringify... yes
checking for argz_next... yes
checking for __fsetlocking... yes
checking whether feof_unlocked is declared... yes
checking whether fgets_unlocked is declared... yes
checking for iconv... (cached) yes
checking for iconv declaration... (cached)
         extern size_t iconv (iconv_t cd, char * *inbuf, size_t *inbytesleft, char * *outbuf, size_t *outbytesleft);
checking for NL_LOCALE_NAME macro... yes
checking for bison... bison
checking version of bison... 3.0.2, ok
checking for long long int... yes
checking for long double... yes
checking for wchar_t... yes
checking for wint_t... yes
checking for intmax_t... yes
checking whether printf() supports POSIX/XSI format strings... yes
checking whether we are using the GNU C Library 2.1 or newer... yes
checking for stdint.h... (cached) yes
checking for SIZE_MAX... yes
checking for stdint.h... (cached) yes
checking for CFPreferencesCopyAppValue... no
checking for CFLocaleCopyCurrent... no
checking for ptrdiff_t... yes
checking stddef.h usability... yes
checking stddef.h presence... yes
checking for stddef.h... yes
checking for stdlib.h... (cached) yes
checking for string.h... (cached) yes
checking for asprintf... yes
checking for fwprintf... yes
checking for putenv... (cached) yes
checking for setenv... yes
checking for setlocale... yes
checking for snprintf... yes
checking for wcslen... yes
checking whether _snprintf is declared... no
checking whether _snwprintf is declared... no
checking whether getc_unlocked is declared... yes
checking for nl_langinfo and CODESET... (cached) yes
checking for LC_MESSAGES... yes
checking for shared library run path origin... done
checking for CFPreferencesCopyAppValue... (cached) no
checking for CFLocaleCopyCurrent... (cached) no
checking whether included gettext is requested... no
checking for GNU gettext in libc... yes
checking whether to use NLS... yes
checking where the gettext function comes from... libc
Finished configuring src/extra/intl directory

using as R_SHELL for scripts ... /bin/bash
configure: creating ./config.status
config.status: creating Makeconf
config.status: creating Makefile
config.status: creating doc/Makefile
config.status: creating doc/html/Makefile
config.status: creating doc/manual/Makefile
config.status: creating etc/Makefile
config.status: creating etc/Makeconf
config.status: creating etc/Renviron
config.status: creating etc/javaconf
config.status: creating etc/ldpaths
config.status: creating m4/Makefile
config.status: creating po/Makefile
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config.status: creating src/extra/pcre/Makefile
config.status: creating src/extra/tre/Makefile
config.status: creating src/extra/tzone/Makefile
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config.status: creating src/extra/xz/Makefile
config.status: creating src/extra/zlib/Makefile
config.status: creating src/include/Makefile
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config.status: creating src/library/base/DESCRIPTION
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config.status: creating src/library/compiler/DESCRIPTION
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config.status: creating src/library/grid/DESCRIPTION
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config.status: src/include/config.h is unchanged
config.status: executing libtool commands
config.status: executing stamp-h commands

R is now configured for x86_64-pc-linux-gnu

  Source directory:          .
  Installation directory:    /usr/local

  C compiler:                icc -std=gnu99  -O3 -ipo -openmp -xHost -multiple-processes
  Fortran 77 compiler:       gfortran  -g -O2

  C++ compiler:              icpc  -O3 -ipo -openmp -xHost -multiple-processes
  C++ 11 compiler:           icpc  -std=c++11 -O3 -ipo -openmp -xHost -multiple-processes
  Fortran 90/95 compiler:    x86_64-linux-gnu-gfortran -g -O2
  Obj-C compiler:	     x86_64-linux-gnu-gcc

  Interfaces supported:      X11, tcltk
  External libraries:        readline, BLAS(generic), LAPACK(in blas), lzma
  Additional capabilities:   PNG, JPEG, TIFF, NLS, cairo
  Options enabled:           R profiling

  Recommended packages:      yes

###############################################################################################

############################ [ make output log (without --enable-R-shlib) ] ################################

make[1]: Entering directory `/home/iwtcr/tmp/R-3.1.1/m4'

make[1]: Nothing to be done for `R'.
make[1]: Leaving directory `/home/iwtcr/tmp/R-3.1.1/m4'
make[1]: Entering directory `/home/iwtcr/tmp/R-3.1.1/tools'
make[1]: Nothing to be done for `R'.
make[1]: Leaving directory `/home/iwtcr/tmp/R-3.1.1/tools'
make[1]: Entering directory `/home/iwtcr/tmp/R-3.1.1/doc'
make[2]: Entering directory `/home/iwtcr/tmp/R-3.1.1/doc/html'
make[2]: Leaving directory `/home/iwtcr/tmp/R-3.1.1/doc/html'
make[2]: Entering directory `/home/iwtcr/tmp/R-3.1.1/doc/manual'
make[2]: Nothing to be done for `R'.
make[2]: Leaving directory `/home/iwtcr/tmp/R-3.1.1/doc/manual'
make[1]: Leaving directory `/home/iwtcr/tmp/R-3.1.1/doc'
make[1]: Entering directory `/home/iwtcr/tmp/R-3.1.1/etc'
make[1]: Leaving directory `/home/iwtcr/tmp/R-3.1.1/etc'
make[1]: Entering directory `/home/iwtcr/tmp/R-3.1.1/share'
make[1]: Leaving directory `/home/iwtcr/tmp/R-3.1.1/share'
make[1]: Entering directory `/home/iwtcr/tmp/R-3.1.1/src'
make[2]: Entering directory `/home/iwtcr/tmp/R-3.1.1/src/scripts'
make[3]: Entering directory `/home/iwtcr/tmp/R-3.1.1/src/scripts'
make[3]: Leaving directory `/home/iwtcr/tmp/R-3.1.1/src/scripts'
make[2]: Leaving directory `/home/iwtcr/tmp/R-3.1.1/src/scripts'
make[2]: Entering directory `/home/iwtcr/tmp/R-3.1.1/src/include'
make[3]: Entering directory `/home/iwtcr/tmp/R-3.1.1/src/include/R_ext'
make[3]: Nothing to be done for `R'.
make[3]: Leaving directory `/home/iwtcr/tmp/R-3.1.1/src/include/R_ext'
make[2]: Leaving directory `/home/iwtcr/tmp/R-3.1.1/src/include'
make[2]: Entering directory `/home/iwtcr/tmp/R-3.1.1/src/extra'
make[3]: Entering directory `/home/iwtcr/tmp/R-3.1.1/src/extra/bzip2'
make[4]: Entering directory `/home/iwtcr/tmp/R-3.1.1/src/extra/bzip2'
make[4]: `libbz2.a' is up to date.
make[4]: Leaving directory `/home/iwtcr/tmp/R-3.1.1/src/extra/bzip2'
make[3]: Leaving directory `/home/iwtcr/tmp/R-3.1.1/src/extra/bzip2'
make[3]: Entering directory `/home/iwtcr/tmp/R-3.1.1/src/extra/pcre'
make[4]: Entering directory `/home/iwtcr/tmp/R-3.1.1/src/extra/pcre'
make[4]: `Makedeps' is up to date.
make[4]: Leaving directory `/home/iwtcr/tmp/R-3.1.1/src/extra/pcre'
make[4]: Entering directory `/home/iwtcr/tmp/R-3.1.1/src/extra/pcre'
rm -f libpcre.a
xiar cr libpcre.a pcre_chartables.o pcre_compile.o pcre_config.o pcre_exec.o pcre_fullinfo.o pcre_get.o pcre_globals.o pcre_jit_compile.o pcre_maketables.o pcre_newline.o pcre_ord2utf8.o pcre_refcount.o pcre_study.o pcre_tables.o pcre_ucd.o pcre_valid_utf8.o pcre_version.o pcre_xclass.o
x86_64-linux-gnu-ranlib libpcre.a
make[4]: Leaving directory `/home/iwtcr/tmp/R-3.1.1/src/extra/pcre'
make[3]: Leaving directory `/home/iwtcr/tmp/R-3.1.1/src/extra/pcre'
make[3]: Entering directory `/home/iwtcr/tmp/R-3.1.1/src/extra/zlib'
making adler32.d from adler32.c
making compress.d from compress.c
making crc32.d from crc32.c
making deflate.d from deflate.c
making infback.d from infback.c
making inffast.d from inffast.c
making inflate.d from inflate.c
making inftrees.d from inftrees.c
making trees.d from trees.c
making uncompr.d from uncompr.c
making zutil.d from zutil.c
make[4]: Entering directory `/home/iwtcr/tmp/R-3.1.1/src/extra/zlib'
icc -std=gnu99 -I.  -DUSE_MMAP -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -fpic -c adler32.c -o adler32.o
icc -std=gnu99 -I.  -DUSE_MMAP -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -fpic -c compress.c -o compress.o
icc -std=gnu99 -I.  -DUSE_MMAP -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -fpic -c crc32.c -o crc32.o
icc -std=gnu99 -I.  -DUSE_MMAP -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -fpic -c deflate.c -o deflate.o
icc -std=gnu99 -I.  -DUSE_MMAP -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -fpic -c infback.c -o infback.o
icc -std=gnu99 -I.  -DUSE_MMAP -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -fpic -c inffast.c -o inffast.o
icc -std=gnu99 -I.  -DUSE_MMAP -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -fpic -c inflate.c -o inflate.o
icc -std=gnu99 -I.  -DUSE_MMAP -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -fpic -c inftrees.c -o inftrees.o
icc -std=gnu99 -I.  -DUSE_MMAP -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -fpic -c trees.c -o trees.o
icc -std=gnu99 -I.  -DUSE_MMAP -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -fpic -c uncompr.c -o uncompr.o
icc -std=gnu99 -I.  -DUSE_MMAP -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -fpic -c zutil.c -o zutil.o
rm -f libz.a
xiar cr libz.a adler32.o compress.o crc32.o deflate.o infback.o inffast.o inflate.o inftrees.o trees.o uncompr.o zutil.o
x86_64-linux-gnu-ranlib libz.a
make[4]: Leaving directory `/home/iwtcr/tmp/R-3.1.1/src/extra/zlib'
make[3]: Leaving directory `/home/iwtcr/tmp/R-3.1.1/src/extra/zlib'
make[3]: Entering directory `/home/iwtcr/tmp/R-3.1.1/src/extra/tre'
make[4]: Entering directory `/home/iwtcr/tmp/R-3.1.1/src/extra/tre'
making regcomp.d from regcomp.c
making regerror.d from regerror.c
making regexec.d from regexec.c
making tre-ast.d from tre-ast.c
making tre-compile.d from tre-compile.c
making tre-match-approx.d from tre-match-approx.c
making tre-match-backtrack.d from tre-match-backtrack.c
making tre-match-parallel.d from tre-match-parallel.c
making tre-mem.d from tre-mem.c
making tre-parse.d from tre-parse.c
making tre-stack.d from tre-stack.c
making xmalloc.d from xmalloc.c
make[4]: Leaving directory `/home/iwtcr/tmp/R-3.1.1/src/extra/tre'
make[4]: Entering directory `/home/iwtcr/tmp/R-3.1.1/src/extra/tre'
icc -std=gnu99 -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c regcomp.c -o regcomp.o
icc -std=gnu99 -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c regerror.c -o regerror.o
icc -std=gnu99 -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c regexec.c -o regexec.o
icc -std=gnu99 -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c tre-ast.c -o tre-ast.o
icc -std=gnu99 -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c tre-compile.c -o tre-compile.o
icc -std=gnu99 -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c tre-match-approx.c -o tre-match-approx.o
icc -std=gnu99 -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c tre-match-backtrack.c -o tre-match-backtrack.o
icc -std=gnu99 -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c tre-match-parallel.c -o tre-match-parallel.o
icc -std=gnu99 -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c tre-mem.c -o tre-mem.o
icc -std=gnu99 -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c tre-parse.c -o tre-parse.o
icc -std=gnu99 -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c tre-stack.c -o tre-stack.o
icc -std=gnu99 -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c xmalloc.c -o xmalloc.o
rm -f libtre.a
xiar cr libtre.a regcomp.o regerror.o regexec.o tre-ast.o tre-compile.o tre-match-approx.o tre-match-backtrack.o tre-match-parallel.o tre-mem.o tre-parse.o tre-stack.o xmalloc.o
x86_64-linux-gnu-ranlib libtre.a
make[4]: Leaving directory `/home/iwtcr/tmp/R-3.1.1/src/extra/tre'
make[3]: Leaving directory `/home/iwtcr/tmp/R-3.1.1/src/extra/tre'
make[2]: Leaving directory `/home/iwtcr/tmp/R-3.1.1/src/extra'
make[2]: Entering directory `/home/iwtcr/tmp/R-3.1.1/src/appl'
making integrate.d from integrate.c
making interv.d from interv.c
making maxcol.d from maxcol.c
making optim.d from optim.c
making pretty.d from pretty.c
making uncmin.d from uncmin.c
make[3]: Entering directory `/home/iwtcr/tmp/R-3.1.1/src/appl'
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c integrate.c -o integrate.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c interv.c -o interv.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c maxcol.c -o maxcol.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c optim.c -o optim.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c pretty.c -o pretty.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c uncmin.c -o uncmin.o
gfortran  -fopenmp  -g -O2  -c dchdc.f -o dchdc.o
gfortran  -fopenmp  -g -O2  -c dpbfa.f -o dpbfa.o
gfortran  -fopenmp  -g -O2  -c dpbsl.f -o dpbsl.o
gfortran  -fopenmp  -g -O2  -c dpoco.f -o dpoco.o
gfortran  -fopenmp  -g -O2  -c dpodi.f -o dpodi.o
gfortran  -fopenmp  -g -O2  -c dpofa.f -o dpofa.o
gfortran  -fopenmp  -g -O2  -c dposl.f -o dposl.o
gfortran  -fopenmp  -g -O2  -c dqrdc.f -o dqrdc.o
gfortran  -fopenmp  -g -O2  -c dqrdc2.f -o dqrdc2.o
gfortran  -fopenmp  -g -O2  -c dqrls.f -o dqrls.o
gfortran  -fopenmp  -g -O2  -c dqrsl.f -o dqrsl.o
gfortran  -fopenmp  -g -O2  -c dqrutl.f -o dqrutl.o
gfortran  -fopenmp  -g -O2  -c dsvdc.f -o dsvdc.o
gfortran  -fopenmp  -g -O2  -c dtrco.f -o dtrco.o
gfortran  -fopenmp  -g -O2  -c dtrsl.f -o dtrsl.o
rm -f libappl.a
xiar cr libappl.a integrate.o interv.o maxcol.o optim.o pretty.o uncmin.o dchdc.o dpbfa.o dpbsl.o dpoco.o dpodi.o dpofa.o dposl.o dqrdc.o dqrdc2.o dqrls.o dqrsl.o dqrutl.o dsvdc.o dtrco.o dtrsl.o
x86_64-linux-gnu-ranlib libappl.a
make[3]: Leaving directory `/home/iwtcr/tmp/R-3.1.1/src/appl'
make[2]: Leaving directory `/home/iwtcr/tmp/R-3.1.1/src/appl'
make[2]: Entering directory `/home/iwtcr/tmp/R-3.1.1/src/nmath'
making mlutils.d from mlutils.c
making d1mach.d from d1mach.c
making i1mach.d from i1mach.c
making fmax2.d from fmax2.c
making fmin2.d from fmin2.c
making fprec.d from fprec.c
making fround.d from fround.c
making ftrunc.d from ftrunc.c
making sign.d from sign.c
making fsign.d from fsign.c
making imax2.d from imax2.c
making imin2.d from imin2.c
making chebyshev.d from chebyshev.c
making log1p.d from log1p.c
making expm1.d from expm1.c
making lgammacor.d from lgammacor.c
making gammalims.d from gammalims.c
making stirlerr.d from stirlerr.c
making bd0.d from bd0.c
making gamma.d from gamma.c
making lgamma.d from lgamma.c
making gamma_cody.d from gamma_cody.c
making beta.d from beta.c
making lbeta.d from lbeta.c
making polygamma.d from polygamma.c
making cospi.d from cospi.c
making bessel_i.d from bessel_i.c
making bessel_j.d from bessel_j.c
making bessel_k.d from bessel_k.c
making bessel_y.d from bessel_y.c
making choose.d from choose.c
making snorm.d from snorm.c
making sexp.d from sexp.c
making dgamma.d from dgamma.c
making pgamma.d from pgamma.c
making qgamma.d from qgamma.c
making rgamma.d from rgamma.c
making dbeta.d from dbeta.c
making pbeta.d from pbeta.c
making qbeta.d from qbeta.c
making rbeta.d from rbeta.c
making dunif.d from dunif.c
making punif.d from punif.c
making qunif.d from qunif.c
making runif.d from runif.c
making dnorm.d from dnorm.c
making pnorm.d from pnorm.c
making qnorm.d from qnorm.c
making rnorm.d from rnorm.c
making dlnorm.d from dlnorm.c
making plnorm.d from plnorm.c
making qlnorm.d from qlnorm.c
making rlnorm.d from rlnorm.c
making df.d from df.c
making pf.d from pf.c
making qf.d from qf.c
making rf.d from rf.c
making dnf.d from dnf.c
making dt.d from dt.c
making pt.d from pt.c
making qt.d from qt.c
making rt.d from rt.c
making dnt.d from dnt.c
making dchisq.d from dchisq.c
making pchisq.d from pchisq.c
making qchisq.d from qchisq.c
making rchisq.d from rchisq.c
making rnchisq.d from rnchisq.c
making dbinom.d from dbinom.c
making pbinom.d from pbinom.c
making qbinom.d from qbinom.c
making rbinom.d from rbinom.c
making rmultinom.d from rmultinom.c
making dcauchy.d from dcauchy.c
making pcauchy.d from pcauchy.c
making qcauchy.d from qcauchy.c
making rcauchy.d from rcauchy.c
making dexp.d from dexp.c
making pexp.d from pexp.c
making qexp.d from qexp.c
making rexp.d from rexp.c
making dgeom.d from dgeom.c
making pgeom.d from pgeom.c
making qgeom.d from qgeom.c
making rgeom.d from rgeom.c
making dhyper.d from dhyper.c
making phyper.d from phyper.c
making qhyper.d from qhyper.c
making rhyper.d from rhyper.c
making dnbinom.d from dnbinom.c
making pnbinom.d from pnbinom.c
making qnbinom.d from qnbinom.c
making rnbinom.d from rnbinom.c
making dpois.d from dpois.c
making ppois.d from ppois.c
making qpois.d from qpois.c
making rpois.d from rpois.c
making dweibull.d from dweibull.c
making pweibull.d from pweibull.c
making qweibull.d from qweibull.c
making rweibull.d from rweibull.c
making dlogis.d from dlogis.c
making plogis.d from plogis.c
making qlogis.d from qlogis.c
making rlogis.d from rlogis.c
making dnchisq.d from dnchisq.c
making pnchisq.d from pnchisq.c
making qnchisq.d from qnchisq.c
making dnbeta.d from dnbeta.c
making pnbeta.d from pnbeta.c
making qnbeta.d from qnbeta.c
making pnf.d from pnf.c
making pnt.d from pnt.c
making qnf.d from qnf.c
making qnt.d from qnt.c
making ptukey.d from ptukey.c
making qtukey.d from qtukey.c
making toms708.d from toms708.c
making wilcox.d from wilcox.c
making signrank.d from signrank.c
make[3]: Entering directory `/home/iwtcr/tmp/R-3.1.1/src/nmath'
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c mlutils.c -o mlutils.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c d1mach.c -o d1mach.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c i1mach.c -o i1mach.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c fmax2.c -o fmax2.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c fmin2.c -o fmin2.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c fprec.c -o fprec.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c fround.c -o fround.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c ftrunc.c -o ftrunc.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c sign.c -o sign.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c fsign.c -o fsign.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c imax2.c -o imax2.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c imin2.c -o imin2.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c chebyshev.c -o chebyshev.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c log1p.c -o log1p.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c expm1.c -o expm1.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c lgammacor.c -o lgammacor.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c gammalims.c -o gammalims.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c stirlerr.c -o stirlerr.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c bd0.c -o bd0.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c gamma.c -o gamma.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c lgamma.c -o lgamma.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c gamma_cody.c -o gamma_cody.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c beta.c -o beta.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c lbeta.c -o lbeta.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c polygamma.c -o polygamma.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c cospi.c -o cospi.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c bessel_i.c -o bessel_i.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c bessel_j.c -o bessel_j.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c bessel_k.c -o bessel_k.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c bessel_y.c -o bessel_y.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c choose.c -o choose.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c snorm.c -o snorm.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c sexp.c -o sexp.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c dgamma.c -o dgamma.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c pgamma.c -o pgamma.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c qgamma.c -o qgamma.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c rgamma.c -o rgamma.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c dbeta.c -o dbeta.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c pbeta.c -o pbeta.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c qbeta.c -o qbeta.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c rbeta.c -o rbeta.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c dunif.c -o dunif.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c punif.c -o punif.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c qunif.c -o qunif.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c runif.c -o runif.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c dnorm.c -o dnorm.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c pnorm.c -o pnorm.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c qnorm.c -o qnorm.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c rnorm.c -o rnorm.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c dlnorm.c -o dlnorm.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c plnorm.c -o plnorm.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c qlnorm.c -o qlnorm.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c rlnorm.c -o rlnorm.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c df.c -o df.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c pf.c -o pf.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c qf.c -o qf.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c rf.c -o rf.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c dnf.c -o dnf.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c dt.c -o dt.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c pt.c -o pt.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c qt.c -o qt.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c rt.c -o rt.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c dnt.c -o dnt.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c dchisq.c -o dchisq.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c pchisq.c -o pchisq.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c qchisq.c -o qchisq.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c rchisq.c -o rchisq.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c rnchisq.c -o rnchisq.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c dbinom.c -o dbinom.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c pbinom.c -o pbinom.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c qbinom.c -o qbinom.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c rbinom.c -o rbinom.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c rmultinom.c -o rmultinom.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c dcauchy.c -o dcauchy.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c pcauchy.c -o pcauchy.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c qcauchy.c -o qcauchy.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c rcauchy.c -o rcauchy.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c dexp.c -o dexp.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c pexp.c -o pexp.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c qexp.c -o qexp.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c rexp.c -o rexp.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c dgeom.c -o dgeom.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c pgeom.c -o pgeom.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c qgeom.c -o qgeom.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c rgeom.c -o rgeom.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c dhyper.c -o dhyper.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c phyper.c -o phyper.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c qhyper.c -o qhyper.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c rhyper.c -o rhyper.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c dnbinom.c -o dnbinom.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c pnbinom.c -o pnbinom.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c qnbinom.c -o qnbinom.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c rnbinom.c -o rnbinom.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c dpois.c -o dpois.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c ppois.c -o ppois.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c qpois.c -o qpois.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c rpois.c -o rpois.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c dweibull.c -o dweibull.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c pweibull.c -o pweibull.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c qweibull.c -o qweibull.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c rweibull.c -o rweibull.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c dlogis.c -o dlogis.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c plogis.c -o plogis.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c qlogis.c -o qlogis.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c rlogis.c -o rlogis.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c dnchisq.c -o dnchisq.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c pnchisq.c -o pnchisq.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c qnchisq.c -o qnchisq.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c dnbeta.c -o dnbeta.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c pnbeta.c -o pnbeta.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c qnbeta.c -o qnbeta.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c pnf.c -o pnf.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c pnt.c -o pnt.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c qnf.c -o qnf.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c qnt.c -o qnt.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c ptukey.c -o ptukey.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c qtukey.c -o qtukey.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c toms708.c -o toms708.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c wilcox.c -o wilcox.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c signrank.c -o signrank.o
rm -rf libnmath.a
xiar cr libnmath.a mlutils.o d1mach.o i1mach.o fmax2.o fmin2.o fprec.o fround.o ftrunc.o sign.o fsign.o imax2.o imin2.o chebyshev.o log1p.o expm1.o lgammacor.o gammalims.o stirlerr.o bd0.o gamma.o lgamma.o gamma_cody.o beta.o lbeta.o polygamma.o cospi.o bessel_i.o bessel_j.o bessel_k.o bessel_y.o choose.o snorm.o sexp.o dgamma.o pgamma.o qgamma.o rgamma.o dbeta.o pbeta.o qbeta.o rbeta.o dunif.o punif.o qunif.o runif.o dnorm.o pnorm.o qnorm.o rnorm.o dlnorm.o plnorm.o qlnorm.o rlnorm.o df.o pf.o qf.o rf.o dnf.o dt.o pt.o qt.o rt.o dnt.o dchisq.o pchisq.o qchisq.o rchisq.o rnchisq.o dbinom.o pbinom.o qbinom.o rbinom.o rmultinom.o dcauchy.o pcauchy.o qcauchy.o rcauchy.o dexp.o pexp.o qexp.o rexp.o dgeom.o pgeom.o qgeom.o rgeom.o dhyper.o phyper.o qhyper.o rhyper.o dnbinom.o pnbinom.o qnbinom.o rnbinom.o dpois.o ppois.o qpois.o rpois.o dweibull.o pweibull.o qweibull.o rweibull.o dlogis.o plogis.o qlogis.o rlogis.o dnchisq.o pnchisq.o qnchisq.o dnbeta.o pnbeta.o qnbeta.o pnf.o pnt.o qnf.o qnt.o ptukey.o qtukey.o toms708.o wilcox.o signrank.o
x86_64-linux-gnu-ranlib libnmath.a
make[3]: Leaving directory `/home/iwtcr/tmp/R-3.1.1/src/nmath'
make[2]: Leaving directory `/home/iwtcr/tmp/R-3.1.1/src/nmath'
make[2]: Entering directory `/home/iwtcr/tmp/R-3.1.1/src/unix'
config.status: creating src/unix/Makefile
make[2]: Leaving directory `/home/iwtcr/tmp/R-3.1.1/src/unix'
make[2]: Entering directory `/home/iwtcr/tmp/R-3.1.1/src/unix'
making Rembedded.d from Rembedded.c
making dynload.d from dynload.c
making system.d from system.c
making sys-unix.d from sys-unix.c
making sys-std.d from sys-std.c
making X11.d from X11.c
make[3]: Entering directory `/home/iwtcr/tmp/R-3.1.1/src/unix'
icc -std=gnu99 -I. -I../../src/include -I../../src/include  -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c Rembedded.c -o Rembedded.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include  -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c dynload.c -o dynload.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include  -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c system.c -o system.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include  -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c sys-unix.c -o sys-unix.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include  -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c sys-std.c -o sys-std.o
icc -std=gnu99 -I. -I../../src/include -I../../src/include  -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c X11.c -o X11.o
rm -rf libunix.a
xiar cr libunix.a Rembedded.o dynload.o system.o sys-unix.o sys-std.o X11.o
x86_64-linux-gnu-ranlib libunix.a
make[3]: Leaving directory `/home/iwtcr/tmp/R-3.1.1/src/unix'
make[3]: Entering directory `/home/iwtcr/tmp/R-3.1.1/src/unix'
icc -std=gnu99 -I. -I../../src/include -I../../src/include  -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -L/usr/local/lib -DR_HOME='"/home/iwtcr/tmp/R-3.1.1"' \
	  -o Rscript ./Rscript.c
make[3]: Leaving directory `/home/iwtcr/tmp/R-3.1.1/src/unix'
make[2]: Leaving directory `/home/iwtcr/tmp/R-3.1.1/src/unix'
make[2]: Entering directory `/home/iwtcr/tmp/R-3.1.1/src/main'
config.status: creating src/main/Makefile
make[2]: Leaving directory `/home/iwtcr/tmp/R-3.1.1/src/main'
make[2]: Entering directory `/home/iwtcr/tmp/R-3.1.1/src/main'
making CommandLineArgs.d from CommandLineArgs.c
making Rdynload.d from Rdynload.c
making Renviron.d from Renviron.c
making RNG.d from RNG.c
making agrep.d from agrep.c
making apply.d from apply.c
making arithmetic.d from arithmetic.c
making array.d from array.c
making attrib.d from attrib.c
making bind.d from bind.c
making builtin.d from builtin.c
making character.d from character.c
making coerce.d from coerce.c
making colors.d from colors.c
making complex.d from complex.c
making connections.d from connections.c
making context.d from context.c
making cum.d from cum.c
making dcf.d from dcf.c
making datetime.d from datetime.c
making debug.d from debug.c
making deparse.d from deparse.c
making devices.d from devices.c
making dotcode.d from dotcode.c
making dounzip.d from dounzip.c
making dstruct.d from dstruct.c
making duplicate.d from duplicate.c
making edit.d from edit.c
making engine.d from engine.c
making envir.d from envir.c
making errors.d from errors.c
making eval.d from eval.c
making format.d from format.c
making gevents.d from gevents.c
making gram.d from gram.c
making gram-ex.d from gram-ex.c
making graphics.d from graphics.c
making grep.d from grep.c
making identical.d from identical.c
making inlined.d from inlined.c
making inspect.d from inspect.c
making internet.d from internet.c
making iosupport.d from iosupport.c
making lapack.d from lapack.c
making list.d from list.c
making localecharset.d from localecharset.c
making logic.d from logic.c
making main.d from main.c
making mapply.d from mapply.c
making match.d from match.c
making memory.d from memory.c
making names.d from names.c
making objects.d from objects.c
making options.d from options.c
making paste.d from paste.c
making platform.d from platform.c
making plot.d from plot.c
making plot3d.d from plot3d.c
making plotmath.d from plotmath.c
making print.d from print.c
making printarray.d from printarray.c
making printvector.d from printvector.c
making printutils.d from printutils.c
making qsort.d from qsort.c
making random.d from random.c
making raw.d from raw.c
making registration.d from registration.c
making relop.d from relop.c
making rlocale.d from rlocale.c
making saveload.d from saveload.c
making scan.d from scan.c
making seq.d from seq.c
making serialize.d from serialize.c
making sort.d from sort.c
making source.d from source.c
making split.d from split.c
making sprintf.d from sprintf.c
making startup.d from startup.c
making subassign.d from subassign.c
making subscript.d from subscript.c
making subset.d from subset.c
making summary.d from summary.c
making sysutils.d from sysutils.c
making times.d from times.c
making unique.d from unique.c
making util.d from util.c
making version.d from version.c
making vfonts.d from vfonts.c
making Rmain.d from Rmain.c
making alloca.d from alloca.c
making mkdtemp.d from mkdtemp.c
making strdup.d from strdup.c
making strncasecmp.d from strncasecmp.c
make[3]: Entering directory `/home/iwtcr/tmp/R-3.1.1/src/main'
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c Rmain.c -o Rmain.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c CommandLineArgs.c -o CommandLineArgs.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c Rdynload.c -o Rdynload.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c Renviron.c -o Renviron.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c RNG.c -o RNG.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c agrep.c -o agrep.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c apply.c -o apply.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c arithmetic.c -o arithmetic.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c array.c -o array.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c attrib.c -o attrib.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c bind.c -o bind.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c builtin.c -o builtin.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c character.c -o character.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c coerce.c -o coerce.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c colors.c -o colors.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c complex.c -o complex.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c connections.c -o connections.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c context.c -o context.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c cum.c -o cum.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c dcf.c -o dcf.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c datetime.c -o datetime.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c debug.c -o debug.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c deparse.c -o deparse.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c devices.c -o devices.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c dotcode.c -o dotcode.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c dounzip.c -o dounzip.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c dstruct.c -o dstruct.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c duplicate.c -o duplicate.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c edit.c -o edit.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c engine.c -o engine.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c envir.c -o envir.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c errors.c -o errors.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c eval.c -o eval.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c format.c -o format.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c gevents.c -o gevents.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c gram.c -o gram.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c gram-ex.c -o gram-ex.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c graphics.c -o graphics.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c grep.c -o grep.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c identical.c -o identical.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c inlined.c -o inlined.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c inspect.c -o inspect.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c internet.c -o internet.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c iosupport.c -o iosupport.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c lapack.c -o lapack.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c list.c -o list.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c localecharset.c -o localecharset.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c logic.c -o logic.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c main.c -o main.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c mapply.c -o mapply.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c match.c -o match.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c memory.c -o memory.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c names.c -o names.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c objects.c -o objects.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c options.c -o options.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c paste.c -o paste.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c platform.c -o platform.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c plot.c -o plot.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c plot3d.c -o plot3d.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c plotmath.c -o plotmath.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c print.c -o print.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c printarray.c -o printarray.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c printvector.c -o printvector.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c printutils.c -o printutils.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c qsort.c -o qsort.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c random.c -o random.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c raw.c -o raw.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c registration.c -o registration.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c relop.c -o relop.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c rlocale.c -o rlocale.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c saveload.c -o saveload.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c scan.c -o scan.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c seq.c -o seq.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c serialize.c -o serialize.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c sort.c -o sort.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c source.c -o source.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c split.c -o split.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c sprintf.c -o sprintf.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c startup.c -o startup.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c subassign.c -o subassign.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c subscript.c -o subscript.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c subset.c -o subset.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c summary.c -o summary.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c sysutils.c -o sysutils.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c times.c -o times.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c unique.c -o unique.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c util.c -o util.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c version.c -o version.o
icc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra   -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H     -O3 -ipo -openmp -xHost -multiple-processes  -c vfonts.c -o vfonts.o
gfortran  -fopenmp  -g -O2  -c xxxpr.f -o xxxpr.o
xiar cr libR.a CommandLineArgs.o Rdynload.o Renviron.o RNG.o agrep.o apply.o arithmetic.o array.o attrib.o bind.o builtin.o character.o coerce.o colors.o complex.o connections.o context.o cum.o dcf.o datetime.o debug.o deparse.o devices.o dotcode.o dounzip.o dstruct.o duplicate.o edit.o engine.o envir.o errors.o eval.o format.o gevents.o gram.o gram-ex.o graphics.o grep.o identical.o inlined.o inspect.o internet.o iosupport.o lapack.o list.o localecharset.o logic.o main.o mapply.o match.o memory.o names.o objects.o options.o paste.o platform.o plot.o plot3d.o plotmath.o print.o printarray.o printvector.o printutils.o qsort.o random.o raw.o registration.o relop.o rlocale.o saveload.o scan.o seq.o serialize.o sort.o source.o split.o sprintf.o startup.o subassign.o subscript.o subset.o summary.o sysutils.o times.o unique.o util.o version.o vfonts.o xxxpr.o   libs/*o
x86_64-linux-gnu-ranlib libR.a
icc -std=gnu99 -Wl,--export-dynamic    -L/usr/local/lib -o R.bin Rmain.o CommandLineArgs.o Rdynload.o Renviron.o RNG.o agrep.o apply.o arithmetic.o array.o attrib.o bind.o builtin.o character.o coerce.o colors.o complex.o connections.o context.o cum.o dcf.o datetime.o debug.o deparse.o devices.o dotcode.o dounzip.o dstruct.o duplicate.o edit.o engine.o envir.o errors.o eval.o format.o gevents.o gram.o gram-ex.o graphics.o grep.o identical.o inlined.o inspect.o internet.o iosupport.o lapack.o list.o localecharset.o logic.o main.o mapply.o match.o memory.o names.o objects.o options.o paste.o platform.o plot.o plot3d.o plotmath.o print.o printarray.o printvector.o printutils.o qsort.o random.o raw.o registration.o relop.o rlocale.o saveload.o scan.o seq.o serialize.o sort.o source.o split.o sprintf.o startup.o subassign.o subscript.o subset.o summary.o sysutils.o times.o unique.o util.o version.o vfonts.o xxxpr.o   `ls ../unix/*.o ../appl/*.o ../nmath/*.o` ../extra/zlib/libz.a ../extra/bzip2/libbz2.a ../extra/pcre/libpcre.a ../extra/tre/libtre.a     -lmkl_gf_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -lpthread -lgfortran -lm -lquadmath   -lreadline  -llzma -lrt -ldl -lm
make[4]: Entering directory `/home/iwtcr/tmp/R-3.1.1/src/main'
mkdir -p -- /home/iwtcr/tmp/R-3.1.1/bin/exec
make[4]: Leaving directory `/home/iwtcr/tmp/R-3.1.1/src/main'
make[3]: Leaving directory `/home/iwtcr/tmp/R-3.1.1/src/main'
make[2]: Leaving directory `/home/iwtcr/tmp/R-3.1.1/src/main'
make[2]: Entering directory `/home/iwtcr/tmp/R-3.1.1/src/modules'
make[3]: Entering directory `/home/iwtcr/tmp/R-3.1.1/src/modules/internet'
making Rhttpd.d from Rhttpd.c
making Rsock.d from Rsock.c
making internet.d from internet.c
making nanoftp.d from nanoftp.c
making nanohttp.d from nanohttp.c
making sock.d from sock.c
making sockconn.d from sockconn.c
make[4]: Entering directory `/home/iwtcr/tmp/R-3.1.1/src/modules/internet'
icc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes   -c Rhttpd.c -o Rhttpd.o
icc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes   -c Rsock.c -o Rsock.o
icc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes   -c internet.c -o internet.o
icc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes   -c nanoftp.c -o nanoftp.o
icc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes   -c nanohttp.c -o nanohttp.o
icc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes   -c sock.c -o sock.o
icc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes   -c sockconn.c -o sockconn.o
icc -std=gnu99 -shared -L/usr/local/lib -o internet.so Rhttpd.o Rsock.o internet.o nanoftp.o nanohttp.o sock.o sockconn.o
make[5]: Entering directory `/home/iwtcr/tmp/R-3.1.1/src/modules/internet'
mkdir -p -- /home/iwtcr/tmp/R-3.1.1/modules
make[5]: Leaving directory `/home/iwtcr/tmp/R-3.1.1/src/modules/internet'
make[4]: Leaving directory `/home/iwtcr/tmp/R-3.1.1/src/modules/internet'
make[3]: Leaving directory `/home/iwtcr/tmp/R-3.1.1/src/modules/internet'
make[3]: Entering directory `/home/iwtcr/tmp/R-3.1.1/src/modules/lapack'
making Lapack.d from Lapack.c
make[4]: Entering directory `/home/iwtcr/tmp/R-3.1.1/src/modules/lapack'
icc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c Lapack.c -o Lapack.o
icc -std=gnu99 -shared -L/usr/local/lib -o lapack.so  Lapack.o     -lmkl_gf_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -lpthread -lgfortran -lm -lquadmath
make[5]: Entering directory `/home/iwtcr/tmp/R-3.1.1/src/modules/lapack'
make[5]: Leaving directory `/home/iwtcr/tmp/R-3.1.1/src/modules/lapack'
make[4]: Leaving directory `/home/iwtcr/tmp/R-3.1.1/src/modules/lapack'
make[3]: Leaving directory `/home/iwtcr/tmp/R-3.1.1/src/modules/lapack'
make[3]: Entering directory `/home/iwtcr/tmp/R-3.1.1/src/modules/vfonts'
making g_alab_her.d from g_alab_her.c
making g_cntrlify.d from g_cntrlify.c
making g_fontdb.d from g_fontdb.c
making g_her_glyph.d from g_her_glyph.c
make[4]: Entering directory `/home/iwtcr/tmp/R-3.1.1/src/modules/vfonts'
icc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c g_alab_her.c -o g_alab_her.o
icc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c g_cntrlify.c -o g_cntrlify.o
icc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c g_fontdb.c -o g_fontdb.o
icc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c g_her_glyph.c -o g_her_glyph.o
icc -std=gnu99 -shared -L/usr/local/lib -o vfonts.so g_alab_her.o g_cntrlify.o g_fontdb.o g_her_glyph.o  -lm
make[5]: Entering directory `/home/iwtcr/tmp/R-3.1.1/src/modules/vfonts'
make[5]: Leaving directory `/home/iwtcr/tmp/R-3.1.1/src/modules/vfonts'
make[4]: Leaving directory `/home/iwtcr/tmp/R-3.1.1/src/modules/vfonts'
make[3]: Leaving directory `/home/iwtcr/tmp/R-3.1.1/src/modules/vfonts'
make[3]: Entering directory `/home/iwtcr/tmp/R-3.1.1/src/modules/X11'
making devX11.d from devX11.c
making rotated.d from rotated.c
making rbitmap.d from rbitmap.c
make[4]: Entering directory `/home/iwtcr/tmp/R-3.1.1/src/modules/X11'
icc -std=gnu99 -I. -I../../../src/include -I../../../src/include  -pthread -I/usr/include/pango-1.0 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I../../../src/library/grDevices/src/cairo -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c devX11.c -o devX11.o
icc -std=gnu99 -I. -I../../../src/include -I../../../src/include  -pthread -I/usr/include/pango-1.0 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I../../../src/library/grDevices/src/cairo -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c rotated.c -o rotated.o
icc -std=gnu99 -I. -I../../../src/include -I../../../src/include  -pthread -I/usr/include/pango-1.0 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I../../../src/library/grDevices/src/cairo -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c rbitmap.c -o rbitmap.o
icc -std=gnu99 -shared -L/usr/local/lib -o R_X11.so devX11.o rotated.o rbitmap.o -lSM -lICE -lpangocairo-1.0 -lpango-1.0 -lgobject-2.0 -lglib-2.0 -lpng12 -lz -lcairo -lX11 -lXext   -lX11 -lXt  -ltiff -ljpeg -lpng -lz  -lm
icc -std=gnu99 -I. -I../../../src/include -I../../../src/include  -pthread -I/usr/include/pango-1.0 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I../../../src/library/grDevices/src/cairo -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c dataentry.c -o dataentry.o
icc -std=gnu99 -shared -L/usr/local/lib -o R_de.so dataentry.o -lSM -lICE -lpangocairo-1.0 -lpango-1.0 -lgobject-2.0 -lglib-2.0 -lpng12 -lz -lcairo -lX11 -lXext   -lX11 -lXt   -lm
make[4]: Leaving directory `/home/iwtcr/tmp/R-3.1.1/src/modules/X11'
make[4]: Entering directory `/home/iwtcr/tmp/R-3.1.1/src/modules/X11'
make[4]: Leaving directory `/home/iwtcr/tmp/R-3.1.1/src/modules/X11'
make[3]: Leaving directory `/home/iwtcr/tmp/R-3.1.1/src/modules/X11'
make[2]: Leaving directory `/home/iwtcr/tmp/R-3.1.1/src/modules'
make[2]: Entering directory `/home/iwtcr/tmp/R-3.1.1/src/library'
mkdir -p -- ../../library
make[3]: Entering directory `/home/iwtcr/tmp/R-3.1.1/src/library/profile'
building system startup profile
mkdir -p -- ../../../library/base/R
make[3]: Leaving directory `/home/iwtcr/tmp/R-3.1.1/src/library/profile'
make[3]: Entering directory `/home/iwtcr/tmp/R-3.1.1/src/library/translations'
building package 'translations'
mkdir -p -- ../../../library/translations
make[4]: Entering directory `/home/iwtcr/tmp/R-3.1.1/src/library/translations'
make[4]: Leaving directory `/home/iwtcr/tmp/R-3.1.1/src/library/translations'
make[3]: Leaving directory `/home/iwtcr/tmp/R-3.1.1/src/library/translations'
make[3]: Entering directory `/home/iwtcr/tmp/R-3.1.1/src/library/base'
building package 'base'
make[4]: Entering directory `/home/iwtcr/tmp/R-3.1.1/src/library/base'
mkdir -p -- ../../../library/base/demo
make[4]: Leaving directory `/home/iwtcr/tmp/R-3.1.1/src/library/base'
make[3]: Leaving directory `/home/iwtcr/tmp/R-3.1.1/src/library/base'
make[3]: Entering directory `/home/iwtcr/tmp/R-3.1.1/src/library/tools'
building package 'tools'
mkdir -p -- ../../../library/tools
make[4]: Entering directory `/home/iwtcr/tmp/R-3.1.1/src/library/tools'
mkdir -p -- ../../../library/tools/R
make[4]: Leaving directory `/home/iwtcr/tmp/R-3.1.1/src/library/tools'
make[4]: Entering directory `/home/iwtcr/tmp/R-3.1.1/src/library/tools'
make[5]: Entering directory `/home/iwtcr/tmp/R-3.1.1/src/library/tools/src'
making text.d from text.c
making init.d from init.c
making Rmd5.d from Rmd5.c
making md5.d from md5.c
making signals.d from signals.c
making install.d from install.c
making getfmts.d from getfmts.c
making http.d from http.c
making gramLatex.d from gramLatex.c
making gramRd.d from gramRd.c
icc -std=gnu99 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c text.c -o text.o
icc -std=gnu99 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c init.c -o init.o
icc -std=gnu99 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c Rmd5.c -o Rmd5.o
icc -std=gnu99 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c md5.c -o md5.o
icc -std=gnu99 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c signals.c -o signals.o
icc -std=gnu99 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c install.c -o install.o
icc -std=gnu99 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c getfmts.c -o getfmts.o
icc -std=gnu99 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c http.c -o http.o
icc -std=gnu99 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c gramLatex.c -o gramLatex.o
icc -std=gnu99 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c gramRd.c -o gramRd.o
icc -std=gnu99 -shared -L/usr/local/lib -o tools.so text.o init.o Rmd5.o md5.o signals.o install.o getfmts.o http.o gramLatex.o gramRd.o
make[6]: Entering directory `/home/iwtcr/tmp/R-3.1.1/src/library/tools/src'
mkdir -p -- ../../../../library/tools/libs
make[6]: Leaving directory `/home/iwtcr/tmp/R-3.1.1/src/library/tools/src'
make[5]: Leaving directory `/home/iwtcr/tmp/R-3.1.1/src/library/tools/src'
make[4]: Leaving directory `/home/iwtcr/tmp/R-3.1.1/src/library/tools'
make[3]: Leaving directory `/home/iwtcr/tmp/R-3.1.1/src/library/tools'
make[3]: Entering directory `/home/iwtcr/tmp/R-3.1.1/src/library/compiler'
building package 'compiler'
mkdir -p -- ../../../library/compiler
make[4]: Entering directory `/home/iwtcr/tmp/R-3.1.1/src/library/compiler'
mkdir -p -- ../../../library/compiler/R
make[4]: Leaving directory `/home/iwtcr/tmp/R-3.1.1/src/library/compiler'
make[4]: Entering directory `/home/iwtcr/tmp/R-3.1.1/src/library/compiler'
byte-compiling package 'compiler'
make[4]: Leaving directory `/home/iwtcr/tmp/R-3.1.1/src/library/compiler'
make[3]: Leaving directory `/home/iwtcr/tmp/R-3.1.1/src/library/compiler'
make[3]: Entering directory `/home/iwtcr/tmp/R-3.1.1/src/library/base'
byte-compiling package 'base'
make[3]: Leaving directory `/home/iwtcr/tmp/R-3.1.1/src/library/base'
make[3]: Entering directory `/home/iwtcr/tmp/R-3.1.1/src/library/tools'
byte-compiling package 'tools'
make[3]: Leaving directory `/home/iwtcr/tmp/R-3.1.1/src/library/tools'
make[3]: Entering directory `/home/iwtcr/tmp/R-3.1.1/src/library/utils'
building package 'utils'
mkdir -p -- ../../../library/utils
mkdir -p -- ../../../library/utils/doc
make[4]: Entering directory `/home/iwtcr/tmp/R-3.1.1/src/library/utils'
mkdir -p -- ../../../library/utils/R
mkdir -p -- ../../../library/utils/Sweave
mkdir -p -- ../../../library/utils/misc
make[4]: Leaving directory `/home/iwtcr/tmp/R-3.1.1/src/library/utils'
make[4]: Entering directory `/home/iwtcr/tmp/R-3.1.1/src/library/utils'
make[5]: Entering directory `/home/iwtcr/tmp/R-3.1.1/src/library/utils/src'
making init.d from init.c
making io.d from io.c
making size.d from size.c
making sock.d from sock.c
making stubs.d from stubs.c
making utils.d from utils.c
icc -std=gnu99 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main  -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c init.c -o init.o
icc -std=gnu99 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main  -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c io.c -o io.o
icc -std=gnu99 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main  -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c size.c -o size.o
icc -std=gnu99 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main  -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c sock.c -o sock.o
icc -std=gnu99 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main  -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c stubs.c -o stubs.o
icc -std=gnu99 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main  -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c utils.c -o utils.o
icc -std=gnu99 -shared -L/usr/local/lib -o utils.so init.o io.o size.o sock.o stubs.o utils.o
make[6]: Entering directory `/home/iwtcr/tmp/R-3.1.1/src/library/utils/src'
mkdir -p -- ../../../../library/utils/libs
make[6]: Leaving directory `/home/iwtcr/tmp/R-3.1.1/src/library/utils/src'
make[5]: Leaving directory `/home/iwtcr/tmp/R-3.1.1/src/library/utils/src'
make[4]: Leaving directory `/home/iwtcr/tmp/R-3.1.1/src/library/utils'
make[4]: Entering directory `/home/iwtcr/tmp/R-3.1.1/src/library/utils'
byte-compiling package 'utils'
make[4]: Leaving directory `/home/iwtcr/tmp/R-3.1.1/src/library/utils'
make[3]: Leaving directory `/home/iwtcr/tmp/R-3.1.1/src/library/utils'
make[3]: Entering directory `/home/iwtcr/tmp/R-3.1.1/src/library/grDevices'
building package 'grDevices'
mkdir -p -- ../../../library/grDevices
make[4]: Entering directory `/home/iwtcr/tmp/R-3.1.1/src/library/grDevices'
mkdir -p -- ../../../library/grDevices/R
mkdir -p -- ../../../library/grDevices/afm
mkdir -p -- ../../../library/grDevices/enc
mkdir -p -- ../../../library/grDevices/icc
make[4]: Leaving directory `/home/iwtcr/tmp/R-3.1.1/src/library/grDevices'
make[4]: Entering directory `/home/iwtcr/tmp/R-3.1.1/src/library/grDevices'
make[5]: Entering directory `/home/iwtcr/tmp/R-3.1.1/src/library/grDevices/src'
making axis_scales.d from axis_scales.c
making chull.d from chull.c
making devices.d from devices.c
making init.d from init.c
making stubs.d from stubs.c
making colors.d from colors.c
making devCairo.d from devCairo.c
making devPicTeX.d from devPicTeX.c
making devPS.d from devPS.c
making devQuartz.d from devQuartz.c
icc -std=gnu99 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/extra/zlib -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c axis_scales.c -o axis_scales.o
icc -std=gnu99 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/extra/zlib -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c chull.c -o chull.o
icc -std=gnu99 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/extra/zlib -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c devices.c -o devices.o
icc -std=gnu99 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/extra/zlib -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c init.c -o init.o
icc -std=gnu99 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/extra/zlib -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c stubs.c -o stubs.o
icc -std=gnu99 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/extra/zlib -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c colors.c -o colors.o
icc -std=gnu99 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/extra/zlib -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c devCairo.c -o devCairo.o
icc -std=gnu99 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/extra/zlib -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c devPicTeX.c -o devPicTeX.o
icc -std=gnu99 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/extra/zlib -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c devPS.c -o devPS.o
icc -std=gnu99 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/extra/zlib -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c devQuartz.c -o devQuartz.o
icc -std=gnu99 -shared -L/usr/local/lib -o grDevices.so axis_scales.o chull.o devices.o init.o stubs.o colors.o devCairo.o devPicTeX.o devPS.o devQuartz.o ../../../../src/extra/zlib/libz.a
make[6]: Entering directory `/home/iwtcr/tmp/R-3.1.1/src/library/grDevices/src'
mkdir -p -- ../../../../library/grDevices/libs
make[7]: Entering directory `/home/iwtcr/tmp/R-3.1.1/src/library/grDevices/src/cairo'
making cairoBM.d from cairoBM.c
make[8]: Entering directory `/home/iwtcr/tmp/R-3.1.1/src/library/grDevices/src/cairo'
make[9]: Entering directory `/home/iwtcr/tmp/R-3.1.1/src/library/grDevices/src/cairo'
icc -std=gnu99 -I. -I../../../../../src/include -I../../../../../src/include -pthread -I/usr/include/pango-1.0 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I../../../../../src/modules/X11 -I/usr/local/include -DHAVE_CONFIG_H    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c cairoBM.c -o cairoBM.o
icc -std=gnu99 -shared -L/usr/local/lib -o cairo.so cairoBM.o ../../../../../src/modules/X11/rbitmap.o -lpangocairo-1.0 -lpango-1.0 -lgobject-2.0 -lglib-2.0 -lpng12 -lz -lcairo   -ltiff -ljpeg -lpng -lz  -lm
make[9]: Leaving directory `/home/iwtcr/tmp/R-3.1.1/src/library/grDevices/src/cairo'
make[8]: Leaving directory `/home/iwtcr/tmp/R-3.1.1/src/library/grDevices/src/cairo'
make[7]: Leaving directory `/home/iwtcr/tmp/R-3.1.1/src/library/grDevices/src/cairo'
make[6]: Leaving directory `/home/iwtcr/tmp/R-3.1.1/src/library/grDevices/src'
make[5]: Leaving directory `/home/iwtcr/tmp/R-3.1.1/src/library/grDevices/src'
make[4]: Leaving directory `/home/iwtcr/tmp/R-3.1.1/src/library/grDevices'
make[4]: Entering directory `/home/iwtcr/tmp/R-3.1.1/src/library/grDevices'
byte-compiling package 'grDevices'
make[4]: Leaving directory `/home/iwtcr/tmp/R-3.1.1/src/library/grDevices'
make[3]: Leaving directory `/home/iwtcr/tmp/R-3.1.1/src/library/grDevices'
make[3]: Entering directory `/home/iwtcr/tmp/R-3.1.1/src/library/graphics'
building package 'graphics'
mkdir -p -- ../../../library/graphics
make[4]: Entering directory `/home/iwtcr/tmp/R-3.1.1/src/library/graphics'
mkdir -p -- ../../../library/graphics/R
make[4]: Leaving directory `/home/iwtcr/tmp/R-3.1.1/src/library/graphics'
make[4]: Entering directory `/home/iwtcr/tmp/R-3.1.1/src/library/graphics'
make[5]: Entering directory `/home/iwtcr/tmp/R-3.1.1/src/library/graphics/src'
making init.d from init.c
making base.d from base.c
making graphics.d from graphics.c
making par.d from par.c
making plot.d from plot.c
making plot3d.d from plot3d.c
making stem.d from stem.c
icc -std=gnu99 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c init.c -o init.o
icc -std=gnu99 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c base.c -o base.o
icc -std=gnu99 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c graphics.c -o graphics.o
icc -std=gnu99 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c par.c -o par.o
icc -std=gnu99 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c plot.c -o plot.o
icc -std=gnu99 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c plot3d.c -o plot3d.o
icc -std=gnu99 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c stem.c -o stem.o
icc -std=gnu99 -shared -L/usr/local/lib -o graphics.so init.o base.o graphics.o par.o plot.o plot3d.o stem.o
make[6]: Entering directory `/home/iwtcr/tmp/R-3.1.1/src/library/graphics/src'
mkdir -p -- ../../../../library/graphics/libs
make[6]: Leaving directory `/home/iwtcr/tmp/R-3.1.1/src/library/graphics/src'
make[5]: Leaving directory `/home/iwtcr/tmp/R-3.1.1/src/library/graphics/src'
make[4]: Leaving directory `/home/iwtcr/tmp/R-3.1.1/src/library/graphics'
make[4]: Entering directory `/home/iwtcr/tmp/R-3.1.1/src/library/graphics'
byte-compiling package 'graphics'
make[4]: Leaving directory `/home/iwtcr/tmp/R-3.1.1/src/library/graphics'
make[3]: Leaving directory `/home/iwtcr/tmp/R-3.1.1/src/library/graphics'
make[3]: Entering directory `/home/iwtcr/tmp/R-3.1.1/src/library/stats'
building package 'stats'
mkdir -p -- ../../../library/stats
make[4]: Entering directory `/home/iwtcr/tmp/R-3.1.1/src/library/stats'
mkdir -p -- ../../../library/stats/R
make[4]: Leaving directory `/home/iwtcr/tmp/R-3.1.1/src/library/stats'
make[4]: Entering directory `/home/iwtcr/tmp/R-3.1.1/src/library/stats'
make[5]: Entering directory `/home/iwtcr/tmp/R-3.1.1/src/library/stats/src'
making init.d from init.c
making kmeans.d from kmeans.c
making ansari.d from ansari.c
making bandwidths.d from bandwidths.c
making chisqsim.d from chisqsim.c
making d2x2xk.d from d2x2xk.c
making fexact.d from fexact.c
making kendall.d from kendall.c
making ks.d from ks.c
making line.d from line.c
making smooth.d from smooth.c
making prho.d from prho.c
making swilk.d from swilk.c
making ksmooth.d from ksmooth.c
making loessc.d from loessc.c
making monoSpl.d from monoSpl.c
making isoreg.d from isoreg.c
making Srunmed.d from Srunmed.c
making dblcen.d from dblcen.c
making distance.d from distance.c
making hclust-utils.d from hclust-utils.c
making nls.d from nls.c
making rWishart.d from rWishart.c
making HoltWinters.d from HoltWinters.c
making PPsum.d from PPsum.c
making arima.d from arima.c
making burg.d from burg.c
making filter.d from filter.c
making mAR.d from mAR.c
making pacf.d from pacf.c
making starma.d from starma.c
making port.d from port.c
making family.d from family.c
making sbart.d from sbart.c
making approx.d from approx.c
making loglin.d from loglin.c
making lowess.d from lowess.c
making massdist.d from massdist.c
making splines.d from splines.c
making lm.d from lm.c
making complete_cases.d from complete_cases.c
making cov.d from cov.c
making deriv.d from deriv.c
making fft.d from fft.c
making fourier.d from fourier.c
making model.d from model.c
making optim.d from optim.c
making optimize.d from optimize.c
making integrate.d from integrate.c
making random.d from random.c
making distn.d from distn.c
making zeroin.d from zeroin.c
making rcont.d from rcont.c
making influence.d from influence.c
icc -std=gnu99 -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c init.c -o init.o
icc -std=gnu99 -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c kmeans.c -o kmeans.o
icc -std=gnu99 -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c ansari.c -o ansari.o
icc -std=gnu99 -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c bandwidths.c -o bandwidths.o
icc -std=gnu99 -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c chisqsim.c -o chisqsim.o
icc -std=gnu99 -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c d2x2xk.c -o d2x2xk.o
icc -std=gnu99 -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c fexact.c -o fexact.o
icc -std=gnu99 -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c kendall.c -o kendall.o
icc -std=gnu99 -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c ks.c -o ks.o
icc -std=gnu99 -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c line.c -o line.o
icc -std=gnu99 -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c smooth.c -o smooth.o
icc -std=gnu99 -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c prho.c -o prho.o
icc -std=gnu99 -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c swilk.c -o swilk.o
icc -std=gnu99 -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c ksmooth.c -o ksmooth.o
icc -std=gnu99 -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c loessc.c -o loessc.o
icc -std=gnu99 -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c monoSpl.c -o monoSpl.o
icc -std=gnu99 -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c isoreg.c -o isoreg.o
icc -std=gnu99 -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c Srunmed.c -o Srunmed.o
icc -std=gnu99 -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c dblcen.c -o dblcen.o
icc -std=gnu99 -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c distance.c -o distance.o
icc -std=gnu99 -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c hclust-utils.c -o hclust-utils.o
icc -std=gnu99 -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c nls.c -o nls.o
icc -std=gnu99 -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c rWishart.c -o rWishart.o
icc -std=gnu99 -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c HoltWinters.c -o HoltWinters.o
icc -std=gnu99 -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c PPsum.c -o PPsum.o
icc -std=gnu99 -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c arima.c -o arima.o
icc -std=gnu99 -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c burg.c -o burg.o
icc -std=gnu99 -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c filter.c -o filter.o
icc -std=gnu99 -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c mAR.c -o mAR.o
icc -std=gnu99 -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c pacf.c -o pacf.o
icc -std=gnu99 -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c starma.c -o starma.o
icc -std=gnu99 -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c port.c -o port.o
icc -std=gnu99 -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c family.c -o family.o
icc -std=gnu99 -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c sbart.c -o sbart.o
icc -std=gnu99 -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c approx.c -o approx.o
icc -std=gnu99 -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c loglin.c -o loglin.o
icc -std=gnu99 -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c lowess.c -o lowess.o
icc -std=gnu99 -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c massdist.c -o massdist.o
icc -std=gnu99 -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c splines.c -o splines.o
icc -std=gnu99 -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c lm.c -o lm.o
icc -std=gnu99 -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c complete_cases.c -o complete_cases.o
icc -std=gnu99 -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c cov.c -o cov.o
icc -std=gnu99 -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c deriv.c -o deriv.o
icc -std=gnu99 -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c fft.c -o fft.o
icc -std=gnu99 -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c fourier.c -o fourier.o
icc -std=gnu99 -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c model.c -o model.o
icc -std=gnu99 -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c optim.c -o optim.o
icc -std=gnu99 -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c optimize.c -o optimize.o
icc -std=gnu99 -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c integrate.c -o integrate.o
icc -std=gnu99 -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c random.c -o random.o
icc -std=gnu99 -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c distn.c -o distn.o
icc -std=gnu99 -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c zeroin.c -o zeroin.o
icc -std=gnu99 -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c rcont.c -o rcont.o
icc -std=gnu99 -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c influence.c -o influence.o
gfortran  -fvisibility=hidden -fpic  -g -O2  -c bsplvd.f -o bsplvd.o
gfortran  -fvisibility=hidden -fpic  -g -O2  -c bvalue.f -o bvalue.o
gfortran  -fvisibility=hidden -fpic  -g -O2  -c bvalus.f -o bvalus.o
gfortran  -fvisibility=hidden -fpic  -g -O2  -c loessf.f -o loessf.o
gfortran  -fvisibility=hidden -fpic  -g -O2  -c ppr.f -o ppr.o
gfortran  -fvisibility=hidden -fpic  -g -O2  -c qsbart.f -o qsbart.o
gfortran  -fvisibility=hidden -fpic  -g -O2  -c sgram.f -o sgram.o
gfortran  -fvisibility=hidden -fpic  -g -O2  -c sinerp.f -o sinerp.o
gfortran  -fvisibility=hidden -fpic  -g -O2  -c sslvrg.f -o sslvrg.o
gfortran  -fvisibility=hidden -fpic  -g -O2  -c stxwx.f -o stxwx.o
gfortran  -fvisibility=hidden -fpic  -g -O2  -c hclust.f -o hclust.o
gfortran  -fvisibility=hidden -fpic  -g -O2  -c kmns.f -o kmns.o
gfortran  -fvisibility=hidden -fpic  -g -O2  -c eureka.f -o eureka.o
gfortran  -fvisibility=hidden -fpic  -g -O2  -c stl.f -o stl.o
gfortran -fpic  -g -O2 -ffloat-store -c portsrc.f -o portsrc.o
gfortran  -fvisibility=hidden -fpic  -g -O2  -c lminfl.f -o lminfl.o
icc -std=gnu99 -shared -L/usr/local/lib -o stats.so init.o kmeans.o ansari.o bandwidths.o chisqsim.o d2x2xk.o fexact.o kendall.o ks.o line.o smooth.o prho.o swilk.o ksmooth.o loessc.o monoSpl.o isoreg.o Srunmed.o dblcen.o distance.o hclust-utils.o nls.o rWishart.o HoltWinters.o PPsum.o arima.o burg.o filter.o mAR.o pacf.o starma.o port.o family.o sbart.o approx.o loglin.o lowess.o massdist.o splines.o lm.o complete_cases.o cov.o deriv.o fft.o fourier.o model.o optim.o optimize.o integrate.o random.o distn.o zeroin.o rcont.o influence.o bsplvd.o bvalue.o bvalus.o loessf.o ppr.o qsbart.o sgram.o sinerp.o sslvrg.o stxwx.o hclust.o kmns.o eureka.o stl.o portsrc.o lminfl.o -lmkl_gf_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -lpthread -lgfortran -lm -lquadmath
make[6]: Entering directory `/home/iwtcr/tmp/R-3.1.1/src/library/stats/src'
mkdir -p -- ../../../../library/stats/libs
make[6]: Leaving directory `/home/iwtcr/tmp/R-3.1.1/src/library/stats/src'
make[5]: Leaving directory `/home/iwtcr/tmp/R-3.1.1/src/library/stats/src'
make[4]: Leaving directory `/home/iwtcr/tmp/R-3.1.1/src/library/stats'
make[4]: Entering directory `/home/iwtcr/tmp/R-3.1.1/src/library/stats'
byte-compiling package 'stats'
make[4]: Leaving directory `/home/iwtcr/tmp/R-3.1.1/src/library/stats'
make[3]: Leaving directory `/home/iwtcr/tmp/R-3.1.1/src/library/stats'
make[3]: Entering directory `/home/iwtcr/tmp/R-3.1.1/src/library/datasets'
building package 'datasets'
mkdir -p -- ../../../library/datasets
make[4]: Entering directory `/home/iwtcr/tmp/R-3.1.1/src/library/datasets'
make[4]: Leaving directory `/home/iwtcr/tmp/R-3.1.1/src/library/datasets'
mkdir -p -- ../../../library/datasets/data
make[3]: Leaving directory `/home/iwtcr/tmp/R-3.1.1/src/library/datasets'
make[3]: Entering directory `/home/iwtcr/tmp/R-3.1.1/src/library/methods'
building package 'methods'
mkdir -p -- ../../../library/methods
make[4]: Entering directory `/home/iwtcr/tmp/R-3.1.1/src/library/methods'
mkdir -p -- ../../../library/methods/R
make[4]: Leaving directory `/home/iwtcr/tmp/R-3.1.1/src/library/methods'
make[4]: Entering directory `/home/iwtcr/tmp/R-3.1.1/src/library/methods'
make[5]: Entering directory `/home/iwtcr/tmp/R-3.1.1/src/library/methods/src'
making do_substitute_direct.d from do_substitute_direct.c
making init.d from init.c
making methods_list_dispatch.d from methods_list_dispatch.c
making slot.d from slot.c
making class_support.d from class_support.c
making tests.d from tests.c
making utils.d from utils.c
icc -std=gnu99 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c do_substitute_direct.c -o do_substitute_direct.o
icc -std=gnu99 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c init.c -o init.o
icc -std=gnu99 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c methods_list_dispatch.c -o methods_list_dispatch.o
icc -std=gnu99 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c slot.c -o slot.o
icc -std=gnu99 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c class_support.c -o class_support.o
icc -std=gnu99 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c tests.c -o tests.o
icc -std=gnu99 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c utils.c -o utils.o
icc -std=gnu99 -shared -L/usr/local/lib -o methods.so do_substitute_direct.o init.o methods_list_dispatch.o slot.o class_support.o tests.o utils.o
make[6]: Entering directory `/home/iwtcr/tmp/R-3.1.1/src/library/methods/src'
mkdir -p -- ../../../../library/methods/libs
make[6]: Leaving directory `/home/iwtcr/tmp/R-3.1.1/src/library/methods/src'
make[5]: Leaving directory `/home/iwtcr/tmp/R-3.1.1/src/library/methods/src'
make[4]: Leaving directory `/home/iwtcr/tmp/R-3.1.1/src/library/methods'
make[4]: Entering directory `/home/iwtcr/tmp/R-3.1.1/src/library/methods'
byte-compiling 'methods'
initializing class and method definitions ... done
make[4]: Leaving directory `/home/iwtcr/tmp/R-3.1.1/src/library/methods'
make[3]: Leaving directory `/home/iwtcr/tmp/R-3.1.1/src/library/methods'
make[3]: Entering directory `/home/iwtcr/tmp/R-3.1.1/src/library/grid'
building package 'grid'
mkdir -p -- ../../../library/grid
mkdir -p -- ../../../library/grid/doc
make[4]: Entering directory `/home/iwtcr/tmp/R-3.1.1/src/library/grid'
mkdir -p -- ../../../library/grid/R
make[4]: Leaving directory `/home/iwtcr/tmp/R-3.1.1/src/library/grid'
make[4]: Entering directory `/home/iwtcr/tmp/R-3.1.1/src/library/grid'
make[5]: Entering directory `/home/iwtcr/tmp/R-3.1.1/src/library/grid/src'
making gpar.d from gpar.c
making grid.d from grid.c
making just.d from just.c
making layout.d from layout.c
making matrix.d from matrix.c
making register.d from register.c
making state.d from state.c
making unit.d from unit.c
making util.d from util.c
making viewport.d from viewport.c
icc -std=gnu99 -I../../../../include -DNDEBUG  -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c gpar.c -o gpar.o
icc -std=gnu99 -I../../../../include -DNDEBUG  -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c grid.c -o grid.o
icc -std=gnu99 -I../../../../include -DNDEBUG  -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c just.c -o just.o
icc -std=gnu99 -I../../../../include -DNDEBUG  -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c layout.c -o layout.o
icc -std=gnu99 -I../../../../include -DNDEBUG  -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c matrix.c -o matrix.o
icc -std=gnu99 -I../../../../include -DNDEBUG  -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c register.c -o register.o
icc -std=gnu99 -I../../../../include -DNDEBUG  -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c state.c -o state.o
icc -std=gnu99 -I../../../../include -DNDEBUG  -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c unit.c -o unit.o
icc -std=gnu99 -I../../../../include -DNDEBUG  -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c util.c -o util.o
icc -std=gnu99 -I../../../../include -DNDEBUG  -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c viewport.c -o viewport.o
icc -std=gnu99 -shared -L/usr/local/lib -o grid.so gpar.o grid.o just.o layout.o matrix.o register.o state.o unit.o util.o viewport.o
make[6]: Entering directory `/home/iwtcr/tmp/R-3.1.1/src/library/grid/src'
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building package 'splines'
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making splines.d from splines.c
icc -std=gnu99 -I../../../../include -DNDEBUG  -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c splines.c -o splines.o
icc -std=gnu99 -shared -L/usr/local/lib -o splines.so splines.o
make[6]: Entering directory `/home/iwtcr/tmp/R-3.1.1/src/library/splines/src'
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building package 'stats4'
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building package 'tcltk'
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making init.d from init.c
making tcltk.d from tcltk.c
making tcltk_unix.d from tcltk_unix.c
icc -std=gnu99 -I../../../../include -DNDEBUG -I/usr/include/tcl8.5 -I/usr/include/tcl8.5  -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c init.c -o init.o
icc -std=gnu99 -I../../../../include -DNDEBUG -I/usr/include/tcl8.5 -I/usr/include/tcl8.5  -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c tcltk.c -o tcltk.o
icc -std=gnu99 -I../../../../include -DNDEBUG -I/usr/include/tcl8.5 -I/usr/include/tcl8.5  -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c tcltk_unix.c -o tcltk_unix.o
icc -std=gnu99 -shared -L/usr/local/lib -o tcltk.so init.o tcltk.o tcltk_unix.o -L/usr/lib/x86_64-linux-gnu -ltcl8.5 -L/usr/lib/x86_64-linux-gnu -ltk8.5 -lX11 -lXss -lXext -lm
make[5]: Entering directory `/home/iwtcr/tmp/R-3.1.1/src/library/tcltk/src'
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byte-compiling package 'tcltk'
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make[3]: Entering directory `/home/iwtcr/tmp/R-3.1.1/src/library/parallel'
building package 'parallel'
mkdir -p -- ../../../library/parallel
mkdir -p -- ../../../library/parallel/doc
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making init.d from init.c
making rngstream.d from rngstream.c
making fork.d from fork.c
icc -std=gnu99 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c init.c -o init.o
icc -std=gnu99 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c rngstream.c -o rngstream.o
icc -std=gnu99 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c fork.c -o fork.o
icc -std=gnu99 -shared -L/usr/local/lib -o parallel.so init.o rngstream.o fork.o
make[6]: Entering directory `/home/iwtcr/tmp/R-3.1.1/src/library/parallel/src'
mkdir -p -- ../../../../library/parallel/libs
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make[4]: Entering directory `/home/iwtcr/tmp/R-3.1.1/src/library/parallel'
byte-compiling package 'parallel'
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installing parsed NAMESPACE files
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make[1]: Entering directory `/home/iwtcr/tmp/R-3.1.1/tests'
make[1]: Nothing to be done for `R'.
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you should 'make docs' now ...
make[1]: Entering directory `/home/iwtcr/tmp/R-3.1.1/doc'
creating NEWS
creating NEWS.pdf
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creating doc/manual/R-FAQ.html
creating doc/manual/version.texi
creating doc/manual/R-admin.html
creating doc/manual/R-data.html
creating doc/manual/R-exts.html
creating doc/manual/R-intro.html
creating doc/manual/R-ints.html
creating doc/manual/R-lang.html
make[3]: Entering directory `/home/iwtcr/tmp/R-3.1.1/doc/html'
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make[1]: Leaving directory `/home/iwtcr/tmp/R-3.1.1/doc'
make[1]: Entering directory `/home/iwtcr/tmp/R-3.1.1/src/library'
make[2]: Entering directory `/home/iwtcr/tmp/R-3.1.1/src/library'
installing parsed Rd
make[3]: Entering directory `/home/iwtcr/tmp/R-3.1.1/src/library'
  base
  stats
  utils
  methods
  graphics
  grDevices
  datasets
  grid
  tools
  tcltk
  splines
  stats4
  compiler
  parallel
make[3]: Leaving directory `/home/iwtcr/tmp/R-3.1.1/src/library'
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make[2]: Entering directory `/home/iwtcr/tmp/R-3.1.1/src/library'
building/updating package metadata ...
make[2]: Leaving directory `/home/iwtcr/tmp/R-3.1.1/src/library'
make[2]: Entering directory `/home/iwtcr/tmp/R-3.1.1/src/library'
writing package indices
make[3]: Entering directory `/home/iwtcr/tmp/R-3.1.1/src/library'
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make[1]: Leaving directory `/home/iwtcr/tmp/R-3.1.1/src/library'
make[1]: Entering directory `/home/iwtcr/tmp/R-3.1.1/src/library/Recommended'
make[2]: Entering directory `/home/iwtcr/tmp/R-3.1.1/src/library/Recommended'
begin installing recommended package MASS
* installing *source* package ‘MASS’ ...
** package ‘MASS’ successfully unpacked and MD5 sums checked
** libs
make[3]: Entering directory `/tmp/Rtmpt5WNa2/R.INSTALL74da1345ce5f/MASS/src'
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG  -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c MASS.c -o MASS.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG  -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c lqs.c -o lqs.o
icc -std=gnu99 -shared -L/usr/local/lib -o MASS.so MASS.o lqs.o
make[3]: Leaving directory `/tmp/Rtmpt5WNa2/R.INSTALL74da1345ce5f/MASS/src'
installing to /home/iwtcr/tmp/R-3.1.1/library/MASS/libs
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded
* DONE (MASS)
begin installing recommended package lattice
* installing *source* package ‘lattice’ ...
** package ‘lattice’ successfully unpacked and MD5 sums checked
** libs
make[3]: Entering directory `/tmp/Rtmphp4H1D/R.INSTALL753753b40b56/lattice/src'
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG  -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c init.c -o init.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG  -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c threeDplot.c -o threeDplot.o
icc -std=gnu99 -shared -L/usr/local/lib -o lattice.so init.o threeDplot.o
make[3]: Leaving directory `/tmp/Rtmphp4H1D/R.INSTALL753753b40b56/lattice/src'
installing to /home/iwtcr/tmp/R-3.1.1/library/lattice/libs
** R
** data
*** moving datasets to lazyload DB
** demo
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded
* DONE (lattice)
begin installing recommended package Matrix
* installing *source* package ‘Matrix’ ...
** package ‘Matrix’ successfully unpacked and MD5 sums checked
** libs
make[3]: Entering directory `/tmp/RtmphsjUZF/R.INSTALL757411382ee0/Matrix/src'
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG -DNTIMER -I./SuiteSparse_config -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c CHMfactor.c -o CHMfactor.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG -DNTIMER -I./SuiteSparse_config -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c Csparse.c -o Csparse.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG -DNTIMER -I./SuiteSparse_config -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c TMatrix_as.c -o TMatrix_as.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG -DNTIMER -I./SuiteSparse_config -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c Tsparse.c -o Tsparse.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG -DNTIMER -I./SuiteSparse_config -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c init.c -o init.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG -DNTIMER -I./SuiteSparse_config -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c Mutils.c -o Mutils.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG -DNTIMER -I./SuiteSparse_config -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c chm_common.c -o chm_common.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG -DNTIMER -I./SuiteSparse_config -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c cs.c -o cs.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG -DNTIMER -I./SuiteSparse_config -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c cs_utils.c -o cs_utils.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG -DNTIMER -I./SuiteSparse_config -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c dense.c -o dense.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG -DNTIMER -I./SuiteSparse_config -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c dgCMatrix.c -o dgCMatrix.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG -DNTIMER -I./SuiteSparse_config -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c dgTMatrix.c -o dgTMatrix.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG -DNTIMER -I./SuiteSparse_config -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c dgeMatrix.c -o dgeMatrix.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG -DNTIMER -I./SuiteSparse_config -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c dpoMatrix.c -o dpoMatrix.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG -DNTIMER -I./SuiteSparse_config -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c dppMatrix.c -o dppMatrix.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG -DNTIMER -I./SuiteSparse_config -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c dsCMatrix.c -o dsCMatrix.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG -DNTIMER -I./SuiteSparse_config -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c dsyMatrix.c -o dsyMatrix.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG -DNTIMER -I./SuiteSparse_config -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c dspMatrix.c -o dspMatrix.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG -DNTIMER -I./SuiteSparse_config -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c dtCMatrix.c -o dtCMatrix.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG -DNTIMER -I./SuiteSparse_config -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c dtTMatrix.c -o dtTMatrix.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG -DNTIMER -I./SuiteSparse_config -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c dtrMatrix.c -o dtrMatrix.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG -DNTIMER -I./SuiteSparse_config -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c dtpMatrix.c -o dtpMatrix.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG -DNTIMER -I./SuiteSparse_config -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c factorizations.c -o factorizations.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG -DNTIMER -I./SuiteSparse_config -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c ldense.c -o ldense.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG -DNTIMER -I./SuiteSparse_config -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c lgCMatrix.c -o lgCMatrix.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG -DNTIMER -I./SuiteSparse_config -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c sparseQR.c -o sparseQR.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG -DNTIMER -I./SuiteSparse_config -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c abIndex.c -o abIndex.o
make[4]: Entering directory `/tmp/RtmphsjUZF/R.INSTALL757411382ee0/Matrix/src/CHOLMOD'
( cd Lib ; make clean )
make[5]: Entering directory `/tmp/RtmphsjUZF/R.INSTALL757411382ee0/Matrix/src/CHOLMOD/Lib'
make[5]: Leaving directory `/tmp/RtmphsjUZF/R.INSTALL757411382ee0/Matrix/src/CHOLMOD/Lib'
make[4]: Leaving directory `/tmp/RtmphsjUZF/R.INSTALL757411382ee0/Matrix/src/CHOLMOD'
make[4]: Entering directory `/tmp/RtmphsjUZF/R.INSTALL757411382ee0/Matrix/src/COLAMD'
( cd Source ; make clean )
make[5]: Entering directory `/tmp/RtmphsjUZF/R.INSTALL757411382ee0/Matrix/src/COLAMD/Source'
make[5]: Leaving directory `/tmp/RtmphsjUZF/R.INSTALL757411382ee0/Matrix/src/COLAMD/Source'
make[4]: Leaving directory `/tmp/RtmphsjUZF/R.INSTALL757411382ee0/Matrix/src/COLAMD'
make[4]: Entering directory `/tmp/RtmphsjUZF/R.INSTALL757411382ee0/Matrix/src/AMD'
( cd Source ; make clean )
make[5]: Entering directory `/tmp/RtmphsjUZF/R.INSTALL757411382ee0/Matrix/src/AMD/Source'
make[5]: Leaving directory `/tmp/RtmphsjUZF/R.INSTALL757411382ee0/Matrix/src/AMD/Source'
make[4]: Leaving directory `/tmp/RtmphsjUZF/R.INSTALL757411382ee0/Matrix/src/AMD'
make[4]: Entering directory `/tmp/RtmphsjUZF/R.INSTALL757411382ee0/Matrix/src/SuiteSparse_config'
make[4]: Leaving directory `/tmp/RtmphsjUZF/R.INSTALL757411382ee0/Matrix/src/SuiteSparse_config'
make[4]: Entering directory `/tmp/RtmphsjUZF/R.INSTALL757411382ee0/Matrix/src/CHOLMOD'
( cd Lib ; make )
make[5]: Entering directory `/tmp/RtmphsjUZF/R.INSTALL757411382ee0/Matrix/src/CHOLMOD/Lib'
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c ../Core/cholmod_aat.c -o cholmod_aat.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c ../Core/cholmod_add.c -o cholmod_add.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c ../Core/cholmod_band.c -o cholmod_band.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c ../Core/cholmod_change_factor.c -o cholmod_change_factor.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c ../Core/cholmod_common.c -o cholmod_common.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c ../Core/cholmod_complex.c -o cholmod_complex.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c ../Core/cholmod_copy.c -o cholmod_copy.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c ../Core/cholmod_dense.c -o cholmod_dense.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c ../Core/cholmod_error.c -o cholmod_error.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c ../Core/cholmod_factor.c -o cholmod_factor.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c ../Core/cholmod_memory.c -o cholmod_memory.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c ../Core/cholmod_sparse.c -o cholmod_sparse.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c ../Core/cholmod_transpose.c -o cholmod_transpose.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c ../Core/cholmod_triplet.c -o cholmod_triplet.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c ../Core/cholmod_version.c -o cholmod_version.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c ../Check/cholmod_check.c -o cholmod_check.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c ../Check/cholmod_read.c -o cholmod_read.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c ../Check/cholmod_write.c -o cholmod_write.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c ../Cholesky/cholmod_amd.c -o cholmod_amd.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c ../Cholesky/cholmod_analyze.c -o cholmod_analyze.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c ../Cholesky/cholmod_colamd.c -o cholmod_colamd.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c ../Cholesky/cholmod_etree.c -o cholmod_etree.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c ../Cholesky/cholmod_factorize.c -o cholmod_factorize.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c ../Cholesky/cholmod_postorder.c -o cholmod_postorder.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c ../Cholesky/cholmod_rcond.c -o cholmod_rcond.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c ../Cholesky/cholmod_resymbol.c -o cholmod_resymbol.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c ../Cholesky/cholmod_rowcolcounts.c -o cholmod_rowcolcounts.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c ../Cholesky/cholmod_rowfac.c -o cholmod_rowfac.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c ../Cholesky/cholmod_solve.c -o cholmod_solve.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c ../Cholesky/cholmod_spsolve.c -o cholmod_spsolve.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c ../MatrixOps/cholmod_drop.c -o cholmod_drop.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c ../MatrixOps/cholmod_horzcat.c -o cholmod_horzcat.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c ../MatrixOps/cholmod_norm.c -o cholmod_norm.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c ../MatrixOps/cholmod_scale.c -o cholmod_scale.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c ../MatrixOps/cholmod_sdmult.c -o cholmod_sdmult.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c ../MatrixOps/cholmod_ssmult.c -o cholmod_ssmult.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c ../MatrixOps/cholmod_submatrix.c -o cholmod_submatrix.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c ../MatrixOps/cholmod_vertcat.c -o cholmod_vertcat.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c ../MatrixOps/cholmod_symmetry.c -o cholmod_symmetry.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c ../Modify/cholmod_rowadd.c -o cholmod_rowadd.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c ../Modify/cholmod_rowdel.c -o cholmod_rowdel.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c ../Modify/cholmod_updown.c -o cholmod_updown.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c ../Supernodal/cholmod_super_numeric.c -o cholmod_super_numeric.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c ../Supernodal/cholmod_super_solve.c -o cholmod_super_solve.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c ../Supernodal/cholmod_super_symbolic.c -o cholmod_super_symbolic.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -DDLONG -c  ../Core/cholmod_aat.c -o cholmod_l_aat.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -DDLONG -c  ../Core/cholmod_add.c -o cholmod_l_add.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -DDLONG -c  ../Core/cholmod_band.c -o cholmod_l_band.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -DDLONG -c  ../Core/cholmod_change_factor.c -o cholmod_l_change_factor.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -DDLONG -c  ../Core/cholmod_common.c -o cholmod_l_common.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -DDLONG -c  ../Core/cholmod_complex.c -o cholmod_l_complex.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -DDLONG -c  ../Core/cholmod_copy.c -o cholmod_l_copy.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -DDLONG -c  ../Core/cholmod_dense.c -o cholmod_l_dense.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -DDLONG -c  ../Core/cholmod_error.c -o cholmod_l_error.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -DDLONG -c  ../Core/cholmod_factor.c -o cholmod_l_factor.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -DDLONG -c  ../Core/cholmod_memory.c -o cholmod_l_memory.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -DDLONG -c  ../Core/cholmod_sparse.c -o cholmod_l_sparse.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -DDLONG -c  ../Core/cholmod_transpose.c -o cholmod_l_transpose.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -DDLONG -c  ../Core/cholmod_triplet.c -o cholmod_l_triplet.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -DDLONG -c  ../Core/cholmod_version.c -o cholmod_l_version.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -DDLONG -c  ../Check/cholmod_check.c -o cholmod_l_check.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -DDLONG -c  ../Check/cholmod_read.c -o cholmod_l_read.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -DDLONG -c  ../Check/cholmod_write.c -o cholmod_l_write.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -DDLONG -c  ../Cholesky/cholmod_amd.c -o cholmod_l_amd.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -DDLONG -c  ../Cholesky/cholmod_analyze.c -o cholmod_l_analyze.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -DDLONG -c  ../Cholesky/cholmod_colamd.c -o cholmod_l_colamd.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -DDLONG -c  ../Cholesky/cholmod_etree.c -o cholmod_l_etree.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -DDLONG -c  ../Cholesky/cholmod_factorize.c -o cholmod_l_factorize.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -DDLONG -c  ../Cholesky/cholmod_postorder.c -o cholmod_l_postorder.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -DDLONG -c  ../Cholesky/cholmod_rcond.c -o cholmod_l_rcond.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -DDLONG -c  ../Cholesky/cholmod_resymbol.c -o cholmod_l_resymbol.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -DDLONG -c  ../Cholesky/cholmod_rowcolcounts.c -o cholmod_l_rowcolcounts.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -DDLONG -c  ../Cholesky/cholmod_rowfac.c -o cholmod_l_rowfac.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -DDLONG -c  ../Cholesky/cholmod_solve.c -o cholmod_l_solve.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -DDLONG -c  ../Cholesky/cholmod_spsolve.c -o cholmod_l_spsolve.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -DDLONG -c  ../MatrixOps/cholmod_drop.c -o cholmod_l_drop.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -DDLONG -c  ../MatrixOps/cholmod_horzcat.c -o cholmod_l_horzcat.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -DDLONG -c  ../MatrixOps/cholmod_norm.c -o cholmod_l_norm.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -DDLONG -c  ../MatrixOps/cholmod_scale.c -o cholmod_l_scale.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -DDLONG -c  ../MatrixOps/cholmod_sdmult.c -o cholmod_l_sdmult.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -DDLONG -c  ../MatrixOps/cholmod_ssmult.c -o cholmod_l_ssmult.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -DDLONG -c  ../MatrixOps/cholmod_submatrix.c -o cholmod_l_submatrix.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -DDLONG -c  ../MatrixOps/cholmod_vertcat.c -o cholmod_l_vertcat.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -DDLONG -c  ../MatrixOps/cholmod_symmetry.c -o cholmod_l_symmetry.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -DDLONG -c  ../Modify/cholmod_rowadd.c -o cholmod_l_rowadd.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -DDLONG -c  ../Modify/cholmod_rowdel.c -o cholmod_l_rowdel.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -DDLONG -c  ../Modify/cholmod_updown.c -o cholmod_l_updown.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -DDLONG -c  ../Supernodal/cholmod_super_numeric.c -o cholmod_l_super_numeric.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -DDLONG -c  ../Supernodal/cholmod_super_solve.c -o cholmod_l_super_solve.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -DDLONG -c  ../Supernodal/cholmod_super_symbolic.c -o cholmod_l_super_symbolic.o
xiar -rucs ../../CHOLMOD.a cholmod_aat.o cholmod_add.o cholmod_band.o cholmod_change_factor.o cholmod_common.o cholmod_complex.o cholmod_copy.o cholmod_dense.o cholmod_error.o cholmod_factor.o cholmod_memory.o cholmod_sparse.o cholmod_transpose.o cholmod_triplet.o cholmod_version.o cholmod_check.o cholmod_read.o cholmod_write.o cholmod_amd.o cholmod_analyze.o cholmod_colamd.o cholmod_etree.o cholmod_factorize.o cholmod_postorder.o cholmod_rcond.o cholmod_resymbol.o cholmod_rowcolcounts.o cholmod_rowfac.o cholmod_solve.o cholmod_spsolve.o cholmod_drop.o cholmod_horzcat.o cholmod_norm.o cholmod_scale.o cholmod_sdmult.o cholmod_ssmult.o cholmod_submatrix.o cholmod_vertcat.o cholmod_symmetry.o cholmod_rowadd.o cholmod_rowdel.o cholmod_updown.o cholmod_super_numeric.o cholmod_super_solve.o cholmod_super_symbolic.o  cholmod_l_aat.o cholmod_l_add.o cholmod_l_band.o cholmod_l_change_factor.o cholmod_l_common.o cholmod_l_complex.o cholmod_l_copy.o cholmod_l_dense.o cholmod_l_error.o cholmod_l_factor.o cholmod_l_memory.o cholmod_l_sparse.o cholmod_l_transpose.o cholmod_l_triplet.o cholmod_l_version.o cholmod_l_check.o cholmod_l_read.o cholmod_l_write.o cholmod_l_amd.o cholmod_l_analyze.o cholmod_l_colamd.o cholmod_l_etree.o cholmod_l_factorize.o cholmod_l_postorder.o cholmod_l_rcond.o cholmod_l_resymbol.o cholmod_l_rowcolcounts.o cholmod_l_rowfac.o cholmod_l_solve.o cholmod_l_spsolve.o cholmod_l_drop.o cholmod_l_horzcat.o cholmod_l_norm.o cholmod_l_scale.o cholmod_l_sdmult.o cholmod_l_ssmult.o cholmod_l_submatrix.o cholmod_l_vertcat.o cholmod_l_symmetry.o cholmod_l_rowadd.o cholmod_l_rowdel.o cholmod_l_updown.o cholmod_l_super_numeric.o cholmod_l_super_solve.o cholmod_l_super_symbolic.o
xiar: executing 'ar'
make[5]: Leaving directory `/tmp/RtmphsjUZF/R.INSTALL757411382ee0/Matrix/src/CHOLMOD/Lib'
make[4]: Leaving directory `/tmp/RtmphsjUZF/R.INSTALL757411382ee0/Matrix/src/CHOLMOD'
make[4]: Entering directory `/tmp/RtmphsjUZF/R.INSTALL757411382ee0/Matrix/src/COLAMD'
( cd Source ; make lib )
make[5]: Entering directory `/tmp/RtmphsjUZF/R.INSTALL757411382ee0/Matrix/src/COLAMD/Source'
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c colamd_global.c -o colamd_global.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c colamd.c -o colamd.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -I../Include -DDLONG -c colamd.c -o colamd_l.o
xiar -rucs ../../COLAMD.a colamd_global.o colamd.o colamd_l.o
xiar: executing 'ar'
make[5]: Leaving directory `/tmp/RtmphsjUZF/R.INSTALL757411382ee0/Matrix/src/COLAMD/Source'
make[4]: Leaving directory `/tmp/RtmphsjUZF/R.INSTALL757411382ee0/Matrix/src/COLAMD'
make[4]: Entering directory `/tmp/RtmphsjUZF/R.INSTALL757411382ee0/Matrix/src/AMD'
( cd Source ; make lib )
make[5]: Entering directory `/tmp/RtmphsjUZF/R.INSTALL757411382ee0/Matrix/src/AMD/Source'
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -I../Include -DDINT -c amd_aat.c -o amd_i_aat.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -I../Include -DDLONG -c amd_aat.c -o amd_l_aat.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -I../Include -DDINT -c amd_1.c -o amd_i_1.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -I../Include -DDLONG -c amd_1.c -o amd_l_1.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -I../Include -DDINT -c amd_2.c -o amd_i_2.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -I../Include -DDLONG -c amd_2.c -o amd_l_2.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -I../Include -DDINT -c amd_postorder.c -o amd_i_postorder.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -I../Include -DDLONG -c amd_postorder.c -o amd_l_postorder.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -I../Include -DDINT -c amd_post_tree.c -o amd_i_post_tree.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -I../Include -DDLONG -c amd_post_tree.c -o amd_l_post_tree.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -I../Include -DDINT -c amd_defaults.c -o amd_i_defaults.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -I../Include -DDLONG -c amd_defaults.c -o amd_l_defaults.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -I../Include -DDINT -c amd_order.c -o amd_i_order.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -I../Include -DDLONG -c amd_order.c -o amd_l_order.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -I../Include -DDINT -c amd_control.c -o amd_i_control.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -I../Include -DDLONG -c amd_control.c -o amd_l_control.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -I../Include -DDINT -c amd_info.c -o amd_i_info.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -I../Include -DDLONG -c amd_info.c -o amd_l_info.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -I../Include -DDINT -c amd_valid.c -o amd_i_valid.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -I../Include -DDLONG -c amd_valid.c -o amd_l_valid.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -I../Include -DDINT -c amd_preprocess.c -o amd_i_preprocess.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -I../Include -DDLONG -c amd_preprocess.c -o amd_l_preprocess.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -I../Include -DDINT -c amd_dump.c -o amd_i_dump.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -I../Include -DDLONG -c amd_dump.c -o amd_l_dump.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -I../Include -DDINT -c amd_global.c -o amd_i_global.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -I../Include -DDLONG -c amd_global.c -o amd_l_global.o
xiar -rucs ../../AMD.a amd_i_aat.o amd_l_aat.o amd_i_1.o amd_l_1.o amd_i_2.o amd_l_2.o amd_i_postorder.o amd_l_postorder.o amd_i_post_tree.o amd_l_post_tree.o amd_i_defaults.o amd_l_defaults.o amd_i_order.o amd_l_order.o amd_i_control.o amd_l_control.o amd_i_info.o amd_l_info.o amd_i_valid.o amd_l_valid.o amd_i_preprocess.o amd_l_preprocess.o amd_i_dump.o amd_l_dump.o amd_i_global.o amd_l_global.o
xiar: executing 'ar'
make[5]: Leaving directory `/tmp/RtmphsjUZF/R.INSTALL757411382ee0/Matrix/src/AMD/Source'
make[4]: Leaving directory `/tmp/RtmphsjUZF/R.INSTALL757411382ee0/Matrix/src/AMD'
make[4]: Entering directory `/tmp/RtmphsjUZF/R.INSTALL757411382ee0/Matrix/src/SuiteSparse_config'
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG -DNTIMER -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c SuiteSparse_config.c -o SuiteSparse_config.o
xiar -rucs ../SuiteSparse_config.a SuiteSparse_config.o
xiar: executing 'ar'
make[4]: Leaving directory `/tmp/RtmphsjUZF/R.INSTALL757411382ee0/Matrix/src/SuiteSparse_config'
icc -std=gnu99 -shared -L/usr/local/lib -o Matrix.so CHMfactor.o Csparse.o TMatrix_as.o Tsparse.o init.o Mutils.o chm_common.o cs.o cs_utils.o dense.o dgCMatrix.o dgTMatrix.o dgeMatrix.o dpoMatrix.o dppMatrix.o dsCMatrix.o dsyMatrix.o dspMatrix.o dtCMatrix.o dtTMatrix.o dtrMatrix.o dtpMatrix.o factorizations.o ldense.o lgCMatrix.o sparseQR.o abIndex.o CHOLMOD.a COLAMD.a AMD.a SuiteSparse_config.a -lmkl_gf_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -lpthread -lgfortran -lm -lquadmath
make[3]: Leaving directory `/tmp/RtmphsjUZF/R.INSTALL757411382ee0/Matrix/src'
installing to /home/iwtcr/tmp/R-3.1.1/library/Matrix/libs
** R
** data
** inst
** byte-compile and prepare package for lazy loading
Creating a generic function for ‘image’ from package ‘graphics’ in package ‘Matrix’
Creating a generic function for ‘solve’ from package ‘base’ in package ‘Matrix’
Creating a generic function for ‘chol2inv’ from ‘base’ in package ‘Matrix’
    (from the saved implicit definition)
Creating a generic function for ‘chol2inv’ from package ‘base’ in package ‘Matrix’
Creating a generic function for ‘determinant’ from package ‘base’ in package ‘Matrix’
Creating a generic function for ‘update’ from package ‘stats’ in package ‘Matrix’
Creating a generic function for ‘as.vector’ from package ‘base’ in package ‘Matrix’
Creating a generic function for ‘t’ from package ‘base’ in package ‘Matrix’
Creating a generic function for ‘diag’ from package ‘base’ in package ‘Matrix’
Creating a generic function for ‘as.matrix’ from package ‘base’ in package ‘Matrix’
Creating a generic function for ‘as.array’ from package ‘base’ in package ‘Matrix’
Creating a generic function for ‘head’ from package ‘utils’ in package ‘Matrix’
Creating a generic function for ‘tail’ from package ‘utils’ in package ‘Matrix’
Creating a generic function for ‘drop’ from package ‘base’ in package ‘Matrix’
Creating a generic function for ‘mean’ from package ‘base’ in package ‘Matrix’
Creating a generic function for ‘cov2cor’ from package ‘stats’ in package ‘Matrix’
Creating a generic function for ‘isSymmetric’ from package ‘base’ in package ‘Matrix’
Creating a generic function for ‘unname’ from package ‘base’ in package ‘Matrix’
Creating a generic function for ‘chol’ from package ‘base’ in package ‘Matrix’
Creating a generic function for ‘norm’ from package ‘base’ in package ‘Matrix’
Creating a generic function for ‘rcond’ from ‘base’ in package ‘Matrix’
    (from the saved implicit definition)
Creating a generic function for ‘rcond’ from package ‘base’ in package ‘Matrix’
Creating a generic function for ‘all.equal’ from package ‘base’ in package ‘Matrix’
Creating a generic function for ‘diff’ from package ‘base’ in package ‘Matrix’
in method for ‘coerce’ with signature ‘"matrix.csr","dgRMatrix"’: no definition for class “matrix.csr”
in method for ‘coerce’ with signature ‘"dgRMatrix","matrix.csr"’: no definition for class “matrix.csr”
in method for ‘coerce’ with signature ‘"matrix.csc","dgCMatrix"’: no definition for class “matrix.csc”
in method for ‘coerce’ with signature ‘"dgCMatrix","matrix.csc"’: no definition for class “matrix.csc”
in method for ‘coerce’ with signature ‘"matrix.coo","dgTMatrix"’: no definition for class “matrix.coo”
in method for ‘coerce’ with signature ‘"dgTMatrix","matrix.coo"’: no definition for class “matrix.coo”
in method for ‘coerce’ with signature ‘"dsparseMatrix","matrix.csr"’: no definition for class “matrix.csr”
in method for ‘coerce’ with signature ‘"matrix.csr","dgCMatrix"’: no definition for class “matrix.csr”
in method for ‘coerce’ with signature ‘"matrix.coo","dgCMatrix"’: no definition for class “matrix.coo”
in method for ‘coerce’ with signature ‘"matrix.csr","RsparseMatrix"’: no definition for class “matrix.csr”
in method for ‘coerce’ with signature ‘"matrix.csc","CsparseMatrix"’: no definition for class “matrix.csc”
in method for ‘coerce’ with signature ‘"matrix.coo","TsparseMatrix"’: no definition for class “matrix.coo”
in method for ‘coerce’ with signature ‘"matrix.csr","CsparseMatrix"’: no definition for class “matrix.csr”
in method for ‘coerce’ with signature ‘"matrix.coo","CsparseMatrix"’: no definition for class “matrix.coo”
in method for ‘coerce’ with signature ‘"matrix.csc","TsparseMatrix"’: no definition for class “matrix.csc”
in method for ‘coerce’ with signature ‘"matrix.csr","TsparseMatrix"’: no definition for class “matrix.csr”
in method for ‘coerce’ with signature ‘"CsparseMatrix","matrix.csr"’: no definition for class “matrix.csr”
in method for ‘coerce’ with signature ‘"CsparseMatrix","matrix.coo"’: no definition for class “matrix.coo”
in method for ‘coerce’ with signature ‘"CsparseMatrix","matrix.csc"’: no definition for class “matrix.csc”
in method for ‘coerce’ with signature ‘"matrix.csr","Matrix"’: no definition for class “matrix.csr”
in method for ‘coerce’ with signature ‘"matrix.coo","Matrix"’: no definition for class “matrix.coo”
in method for ‘coerce’ with signature ‘"matrix.csc","Matrix"’: no definition for class “matrix.csc”
Creating a generic function for ‘colSums’ from package ‘base’ in package ‘Matrix’
Creating a generic function for ‘colMeans’ from package ‘base’ in package ‘Matrix’
Creating a generic function for ‘rowSums’ from package ‘base’ in package ‘Matrix’
Creating a generic function for ‘rowMeans’ from package ‘base’ in package ‘Matrix’
in method for ‘colSums’ with signature ‘x="igCMatrix"’: no definition for class “igCMatrix”
in method for ‘rowSums’ with signature ‘x="igCMatrix"’: no definition for class “igCMatrix”
in method for ‘colMeans’ with signature ‘x="igCMatrix"’: no definition for class “igCMatrix”
in method for ‘rowMeans’ with signature ‘x="igCMatrix"’: no definition for class “igCMatrix”
Creating a generic function for ‘zapsmall’ from package ‘base’ in package ‘Matrix’
Creating a generic function for ‘qr’ from package ‘base’ in package ‘Matrix’
Creating a generic function for ‘diag<-’ from package ‘base’ in package ‘Matrix’
Creating a generic function for ‘crossprod’ from package ‘base’ in package ‘Matrix’
Creating a generic function for ‘tcrossprod’ from package ‘base’ in package ‘Matrix’
Creating a generic function for ‘print’ from package ‘base’ in package ‘Matrix’
Creating a generic function for ‘summary’ from package ‘base’ in package ‘Matrix’
Creating a generic function for ‘which’ from package ‘base’ in package ‘Matrix’
in method for ‘coerce’ with signature ‘"graphAM","sparseMatrix"’: no definition for class “graphAM”
in method for ‘coerce’ with signature ‘"graph","CsparseMatrix"’: no definition for class “graph”
in method for ‘coerce’ with signature ‘"graph","Matrix"’: no definition for class “graph”
in method for ‘coerce’ with signature ‘"graphNEL","CsparseMatrix"’: no definition for class “graphNEL”
in method for ‘coerce’ with signature ‘"graphNEL","TsparseMatrix"’: no definition for class “graphNEL”
in method for ‘coerce’ with signature ‘"sparseMatrix","graph"’: no definition for class “graph”
in method for ‘coerce’ with signature ‘"sparseMatrix","graphNEL"’: no definition for class “graphNEL”
in method for ‘coerce’ with signature ‘"TsparseMatrix","graphNEL"’: no definition for class “graphNEL”
Creating a generic function for ‘format’ from package ‘base’ in package ‘Matrix’
Creating a generic function for ‘qr.R’ from package ‘base’ in package ‘Matrix’
Creating a generic function for ‘qr.Q’ from package ‘base’ in package ‘Matrix’
Creating a generic function for ‘qr.qy’ from package ‘base’ in package ‘Matrix’
Creating a generic function for ‘qr.qty’ from package ‘base’ in package ‘Matrix’
Creating a generic function for ‘qr.coef’ from package ‘base’ in package ‘Matrix’
Creating a generic function for ‘qr.resid’ from package ‘base’ in package ‘Matrix’
Creating a generic function for ‘qr.fitted’ from package ‘base’ in package ‘Matrix’
** help
*** installing help indices
** building package indices
Loading required package: Matrix
** installing vignettes
   ‘Comparisons.Rnw’
   ‘Design-issues.Rnw’
   ‘Intro2Matrix.Rnw’
   ‘Introduction.Rnw’
   ‘sparseModels.Rnw’
** testing if installed package can be loaded
* DONE (Matrix)
begin installing recommended package nlme
* installing *source* package ‘nlme’ ...
** package ‘nlme’ successfully unpacked and MD5 sums checked
** libs
make[3]: Entering directory `/tmp/RtmpZ3QomF/R.INSTALL7bb02f19547a/nlme/src'
gfortran   -fpic  -g -O2  -c chol.f -o chol.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG  -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c corStruct.c -o corStruct.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG  -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c gnls.c -o gnls.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG  -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c init.c -o init.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG  -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c matrix.c -o matrix.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG  -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c nlOptimizer.c -o nlOptimizer.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG  -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c nlme.c -o nlme.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG  -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c nlmefit.c -o nlmefit.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG  -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c nls.c -o nls.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG  -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c pdMat.c -o pdMat.o
gfortran   -fpic  -g -O2  -c rs.f -o rs.o
icc -std=gnu99 -shared -L/usr/local/lib -o nlme.so chol.o corStruct.o gnls.o init.o matrix.o nlOptimizer.o nlme.o nlmefit.o nls.o pdMat.o rs.o -lgfortran -lm -lquadmath
make[3]: Leaving directory `/tmp/RtmpZ3QomF/R.INSTALL7bb02f19547a/nlme/src'
installing to /home/iwtcr/tmp/R-3.1.1/library/nlme/libs
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded
* DONE (nlme)
begin installing recommended package survival
* installing *source* package ‘survival’ ...
** package ‘survival’ successfully unpacked and MD5 sums checked
** libs
make[3]: Entering directory `/tmp/Rtmp63hQZ2/R.INSTALL7c33a47ffc0/survival/src'
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG  -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c agexact.c -o agexact.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG  -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c agfit4.c -o agfit4.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG  -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c agfit5.c -o agfit5.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG  -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c agmart.c -o agmart.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG  -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c agmart2.c -o agmart2.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG  -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c agscore.c -o agscore.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG  -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c agsurv3.c -o agsurv3.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG  -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c agsurv4.c -o agsurv4.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG  -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c agsurv5.c -o agsurv5.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG  -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c chinv2.c -o chinv2.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG  -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c chinv3.c -o chinv3.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG  -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c cholesky2.c -o cholesky2.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG  -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c cholesky3.c -o cholesky3.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG  -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c chsolve2.c -o chsolve2.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG  -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c chsolve3.c -o chsolve3.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG  -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c concordance1.c -o concordance1.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG  -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c cox_Rcallback.c -o cox_Rcallback.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG  -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c coxcount1.c -o coxcount1.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG  -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c coxdetail.c -o coxdetail.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG  -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c coxexact.c -o coxexact.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG  -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c coxfit5.c -o coxfit5.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG  -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c coxfit6.c -o coxfit6.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG  -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c coxmart.c -o coxmart.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG  -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c coxmart2.c -o coxmart2.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG  -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c coxph_wtest.c -o coxph_wtest.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG  -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c coxsafe.c -o coxsafe.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG  -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c coxscho.c -o coxscho.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG  -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c coxscore.c -o coxscore.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG  -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c dmatrix.c -o dmatrix.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG  -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c doloop.c -o doloop.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG  -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c init.c -o init.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG  -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c msurv.c -o msurv.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG  -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c pyears1.c -o pyears1.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG  -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c pyears2.c -o pyears2.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG  -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c pyears3b.c -o pyears3b.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG  -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c pystep.c -o pystep.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG  -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c survConcordance.c -o survConcordance.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG  -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c survdiff2.c -o survdiff2.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG  -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c survfit4.c -o survfit4.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG  -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c survfitci.c -o survfitci.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG  -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c survpenal.c -o survpenal.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG  -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c survreg6.c -o survreg6.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG  -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c survreg7.c -o survreg7.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG  -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c survregc1.c -o survregc1.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG  -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c survregc2.c -o survregc2.o
icc -std=gnu99 -shared -L/usr/local/lib -o survival.so agexact.o agfit4.o agfit5.o agmart.o agmart2.o agscore.o agsurv3.o agsurv4.o agsurv5.o chinv2.o chinv3.o cholesky2.o cholesky3.o chsolve2.o chsolve3.o concordance1.o cox_Rcallback.o coxcount1.o coxdetail.o coxexact.o coxfit5.o coxfit6.o coxmart.o coxmart2.o coxph_wtest.o coxsafe.o coxscho.o coxscore.o dmatrix.o doloop.o init.o msurv.o pyears1.o pyears2.o pyears3b.o pystep.o survConcordance.o survdiff2.o survfit4.o survfitci.o survpenal.o survreg6.o survreg7.o survregc1.o survregc2.o
make[3]: Leaving directory `/tmp/Rtmp63hQZ2/R.INSTALL7c33a47ffc0/survival/src'
installing to /home/iwtcr/tmp/R-3.1.1/library/survival/libs
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (survival)
begin installing recommended package boot
* installing *source* package ‘boot’ ...
** package ‘boot’ successfully unpacked and MD5 sums checked
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded
* DONE (boot)
begin installing recommended package cluster
* installing *source* package ‘cluster’ ...
** package ‘cluster’ successfully unpacked and MD5 sums checked
** libs
make[3]: Entering directory `/tmp/RtmpP3DfLd/R.INSTALL7e0e4ba793d6/cluster/src'
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG  -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c clara.c -o clara.o
gfortran   -fpic  -g -O2  -c daisy.f -o daisy.o
gfortran   -fpic  -g -O2  -c dysta.f -o dysta.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG  -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c fanny.c -o fanny.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG  -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c init.c -o init.o
gfortran   -fpic  -g -O2  -c mona.f -o mona.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG  -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c pam.c -o pam.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG  -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c sildist.c -o sildist.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG  -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c spannel.c -o spannel.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG  -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c twins.c -o twins.o
icc -std=gnu99 -shared -L/usr/local/lib -o cluster.so clara.o daisy.o dysta.o fanny.o init.o mona.o pam.o sildist.o spannel.o twins.o -lgfortran -lm -lquadmath
make[3]: Leaving directory `/tmp/RtmpP3DfLd/R.INSTALL7e0e4ba793d6/cluster/src'
installing to /home/iwtcr/tmp/R-3.1.1/library/cluster/libs
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded
* DONE (cluster)
begin installing recommended package codetools
* installing *source* package ‘codetools’ ...
** R
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded
* DONE (codetools)
begin installing recommended package foreign
* installing *source* package ‘foreign’ ...
** package ‘foreign’ successfully unpacked and MD5 sums checked
** libs
make[3]: Entering directory `/tmp/RtmpmA928A/R.INSTALL7e94143ac8b/foreign/src'
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG  -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c R_systat.c -o R_systat.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG  -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c Rdbfread.c -o Rdbfread.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG  -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c Rdbfwrite.c -o Rdbfwrite.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG  -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c SASxport.c -o SASxport.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG  -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c avl.c -o avl.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG  -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c dbfopen.c -o dbfopen.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG  -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c file-handle.c -o file-handle.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG  -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c format.c -o format.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG  -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c init.c -o init.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG  -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c minitab.c -o minitab.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG  -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c pfm-read.c -o pfm-read.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG  -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c sfm-read.c -o sfm-read.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG  -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c spss.c -o spss.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG  -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c stataread.c -o stataread.o
icc -std=gnu99 -shared -L/usr/local/lib -o foreign.so R_systat.o Rdbfread.o Rdbfwrite.o SASxport.o avl.o dbfopen.o file-handle.o format.o init.o minitab.o pfm-read.o sfm-read.o spss.o stataread.o
make[3]: Leaving directory `/tmp/RtmpmA928A/R.INSTALL7e94143ac8b/foreign/src'
installing to /home/iwtcr/tmp/R-3.1.1/library/foreign/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded
* DONE (foreign)
begin installing recommended package KernSmooth
* installing *source* package ‘KernSmooth’ ...
** package ‘KernSmooth’ successfully unpacked and MD5 sums checked
** libs
make[3]: Entering directory `/tmp/RtmpUBiBzw/R.INSTALL7f3e10d9d5d7/KernSmooth/src'
gfortran   -fpic  -g -O2  -c blkest.f -o blkest.o
gfortran   -fpic  -g -O2  -c cp.f -o cp.o
gfortran   -fpic  -g -O2  -c dgedi.f -o dgedi.o
gfortran   -fpic  -g -O2  -c dgefa.f -o dgefa.o
gfortran   -fpic  -g -O2  -c dgesl.f -o dgesl.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG  -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c init.c -o init.o
gfortran   -fpic  -g -O2  -c linbin.f -o linbin.o
gfortran   -fpic  -g -O2  -c linbin2D.f -o linbin2D.o
gfortran   -fpic  -g -O2  -c locpoly.f -o locpoly.o
gfortran   -fpic  -g -O2  -c rlbin.f -o rlbin.o
gfortran   -fpic  -g -O2  -c sdiag.f -o sdiag.o
gfortran   -fpic  -g -O2  -c sstdiag.f -o sstdiag.o
icc -std=gnu99 -shared -L/usr/local/lib -o KernSmooth.so blkest.o cp.o dgedi.o dgefa.o dgesl.o init.o linbin.o linbin2D.o locpoly.o rlbin.o sdiag.o sstdiag.o -lmkl_gf_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -lpthread -lgfortran -lm -lquadmath -lgfortran -lm -lquadmath
make[3]: Leaving directory `/tmp/RtmpUBiBzw/R.INSTALL7f3e10d9d5d7/KernSmooth/src'
installing to /home/iwtcr/tmp/R-3.1.1/library/KernSmooth/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded
* DONE (KernSmooth)
begin installing recommended package rpart
* installing *source* package ‘rpart’ ...
** package ‘rpart’ successfully unpacked and MD5 sums checked
** libs
make[3]: Entering directory `/tmp/RtmpQs1oSx/R.INSTALL7f97442a2b78/rpart/src'
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG  -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c anova.c -o anova.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG  -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c anovapred.c -o anovapred.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG  -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c branch.c -o branch.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG  -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c bsplit.c -o bsplit.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG  -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c choose_surg.c -o choose_surg.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG  -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c fix_cp.c -o fix_cp.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG  -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c free_tree.c -o free_tree.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG  -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c gini.c -o gini.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG  -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c graycode.c -o graycode.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG  -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c init.c -o init.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG  -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c insert_split.c -o insert_split.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG  -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c make_cp_list.c -o make_cp_list.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG  -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c make_cp_table.c -o make_cp_table.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG  -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c mysort.c -o mysort.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG  -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c nodesplit.c -o nodesplit.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG  -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c partition.c -o partition.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG  -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c poisson.c -o poisson.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG  -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c pred_rpart.c -o pred_rpart.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG  -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c print_tree.c -o print_tree.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG  -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c rpart.c -o rpart.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG  -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c rpart_callback.c -o rpart_callback.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG  -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c rpartexp.c -o rpartexp.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG  -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c rpartexp2.c -o rpartexp2.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG  -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c rpcountup.c -o rpcountup.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG  -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c rpmatrix.c -o rpmatrix.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG  -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c rundown.c -o rundown.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG  -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c rundown2.c -o rundown2.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG  -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c surrogate.c -o surrogate.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG  -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c usersplit.c -o usersplit.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG  -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c xpred.c -o xpred.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG  -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c xval.c -o xval.o
icc -std=gnu99 -shared -L/usr/local/lib -o rpart.so anova.o anovapred.o branch.o bsplit.o choose_surg.o fix_cp.o free_tree.o gini.o graycode.o init.o insert_split.o make_cp_list.o make_cp_table.o mysort.o nodesplit.o partition.o poisson.o pred_rpart.o print_tree.o rpart.o rpart_callback.o rpartexp.o rpartexp2.o rpcountup.o rpmatrix.o rundown.o rundown2.o surrogate.o usersplit.o xpred.o xval.o
make[3]: Leaving directory `/tmp/RtmpQs1oSx/R.INSTALL7f97442a2b78/rpart/src'
installing to /home/iwtcr/tmp/R-3.1.1/library/rpart/libs
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (rpart)
begin installing recommended package class
* installing *source* package ‘class’ ...
** package ‘class’ successfully unpacked and MD5 sums checked
** libs
make[3]: Entering directory `/tmp/RtmpUujASj/R.INSTALL20c7f93a03e/class/src'
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG  -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c class.c -o class.o
icc -std=gnu99 -shared -L/usr/local/lib -o class.so class.o
make[3]: Leaving directory `/tmp/RtmpUujASj/R.INSTALL20c7f93a03e/class/src'
installing to /home/iwtcr/tmp/R-3.1.1/library/class/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded
* DONE (class)
begin installing recommended package nnet
* installing *source* package ‘nnet’ ...
** package ‘nnet’ successfully unpacked and MD5 sums checked
** libs
make[3]: Entering directory `/tmp/RtmpKTQUpz/R.INSTALL23f5d2f9ac5/nnet/src'
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG  -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c nnet.c -o nnet.o
icc -std=gnu99 -shared -L/usr/local/lib -o nnet.so nnet.o
make[3]: Leaving directory `/tmp/RtmpKTQUpz/R.INSTALL23f5d2f9ac5/nnet/src'
installing to /home/iwtcr/tmp/R-3.1.1/library/nnet/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded
* DONE (nnet)
begin installing recommended package spatial
* installing *source* package ‘spatial’ ...
** package ‘spatial’ successfully unpacked and MD5 sums checked
** libs
make[3]: Entering directory `/tmp/Rtmp2ppLQr/R.INSTALL2751097944f/spatial/src'
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG  -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c init.c -o init.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG  -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c krc.c -o krc.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG  -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c pps.c -o pps.o
icc -std=gnu99 -shared -L/usr/local/lib -o spatial.so init.o krc.o pps.o
make[3]: Leaving directory `/tmp/Rtmp2ppLQr/R.INSTALL2751097944f/spatial/src'
installing to /home/iwtcr/tmp/R-3.1.1/library/spatial/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded
* DONE (spatial)
begin installing recommended package mgcv
* installing *source* package ‘mgcv’ ...
** package ‘mgcv’ successfully unpacked and MD5 sums checked
** libs
make[3]: Entering directory `/tmp/RtmptAZzsv/R.INSTALL2b664be8a7/mgcv/src'
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG  -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c coxph.c -o coxph.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG  -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c gdi.c -o gdi.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG  -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c init.c -o init.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG  -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c magic.c -o magic.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG  -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c mat.c -o mat.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG  -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c matrix.c -o matrix.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG  -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c mgcv.c -o mgcv.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG  -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c misc.c -o misc.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG  -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c mvn.c -o mvn.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG  -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c qp.c -o qp.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG  -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c soap.c -o soap.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG  -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c sparse-smooth.c -o sparse-smooth.o
icc -std=gnu99 -I/home/iwtcr/tmp/R-3.1.1/include -DNDEBUG  -I/usr/local/include    -fpic  -O3 -ipo -openmp -xHost -multiple-processes  -c tprs.c -o tprs.o
icc -std=gnu99 -shared -L/usr/local/lib -o mgcv.so coxph.o gdi.o init.o magic.o mat.o matrix.o mgcv.o misc.o mvn.o qp.o soap.o sparse-smooth.o tprs.o -lmkl_gf_lp64 -lmkl_intel_thread -lmkl_core -liomp5 -lpthread -lgfortran -lm -lquadmath
make[3]: Leaving directory `/tmp/RtmptAZzsv/R.INSTALL2b664be8a7/mgcv/src'
installing to /home/iwtcr/tmp/R-3.1.1/library/mgcv/libs
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded
* DONE (mgcv)
make[2]: Leaving directory `/home/iwtcr/tmp/R-3.1.1/src/library/Recommended'
make[1]: Leaving directory `/home/iwtcr/tmp/R-3.1.1/src/library/Recommended'
make[1]: Entering directory `/home/iwtcr/tmp/R-3.1.1/src/library'
building/updating vignettes for package 'grid' ...
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Steve:

I have stumbled into this interesting problem - I need to invert a large (5000 by 5000) sparse matrix.

Clearly I am going to use MKL but I have not played previously with sparse matrices.  The numbers are straightforward doubles.

Which is the best routine to call and what is the best method to create a sparse array - about 10% density is my guess?

regards

JMN

Hi, 

I am replacing certain operations specifically vector dot product,matrix vector multiplication and solve AX=b in existing code by calls to lapack subroutines. Do I need to link the MKL in the makefile explicitly? 

The following is content of my makefile

!-----------------------------------------------------------

.SUFFIXES: .o .f90

.f90.o:

    $(F90) -c $(F90FLAGS) $<

F90 = ifort -warn -WB -C

LD  = $(F90)

LIBS = -ldl

PROFILE = -fast

OPTFLAGS = -g

CFLAGS = $(OPTFLAGS) $(PROFILE)

F90FLAGS = $(CFLAGS)

LDFLAGS =  

PROGRAM = fadd2d

F90SRCS = global.f90 main.f90 nrtype.f90 nrutil.f90 remesh_module.f90 \

          prep.f90 elem_charles.f90 \

          assemb_charles.f90 formakf_charles.f90 gauss.f90 shape.f90 solver.f90 \

          post_remesh.f90 proc.f90 volume_solver.f90 pressure_solver.f90 \

          rearge.f90 sif.f90 sifaniso.f90 root.f90 kernel1_c.f90 kernel2.f90 \

          tstress.f90 tstress1.f90 tstress2.f90 tstress2a.f90 tstress3.f90 \

          assemb_tstress.f90 rigidinner4.f90

SRCS = $(F90SRCS) 

OBJS = $(F90SRCS:.f90=.o)

all: $(PROGRAM)

$(PROGRAM): $(OBJS)

    $(LD) -o $@ $(LDFLAGS) $(OBJS) $(LIBS)

elem_charles.o: elem_charles.f90 ekc_8.f90 ekd_8_temp.f90 ek_b2.f90 ek_at2.f90 \

        eatts2.f90 eattip.f90 eat3.f90 ebts2.f90 ebtip.f90 eb3.f90 \

        eat_rigid.f90 eb_rigid.f90

    $(F90) -c $(F90FLAGS) elem_charles.f90

#Dec10_09: add prep.f90 to following line to recompile prep.f90

prep.o: prep.f90 setint.f90

    $(F90) -c $(F90FLAGS) prep.f90

clean:

    rm -f $(OBJS) $(PROGRAM)

    rm *.mod

tidy:

    rm -f *.BAK *.bak *.CKP *~

undepend:

    rm -f $(OBJS:%.o=.%.d) 

spotless: tidy clean undepend

!-----------------------------------------------------------

Thanks

Saumik Dana.

Hi,

I am trying to benchmark the intel mkl library function mkl_dcsrmv. I tried running the function for single, three,five and seven diagonals nnz entries and i repeated it multiple times with different values and different matrix size.  The maximum efficiency I could achieve was 432MFLOPs which is 3%. The code snippet used to measure the time is attached below. I am running it on a 2Ghz, core2duo processor. The result sheet, in which the obtained time value and the MFLOP calculation is also attached. Can some one tell me if there is some bug in my code or is the performance of mkl not optimized for core2duo? I have checked my system configuration and it has SSE2 instruction support, which is the requirement mentioned in the manual.

Thanks for your help!

/********************************************************************************
*   Content : Simple MKL Sparse Matrix-Vector Multiply in C
*
********************************************************************************/

#include <stdio.h>
#include <time.h>
#include <stdlib.h>
#define BILLION  1000000000L;
#include "mkl.h"





int main(int argc, char* argv[])
{

	int i, j;
	int m;
	int k;
	int nnz;
	double alpha;
	double beta;
	//double val[] = {1,2,4,5,6,5,8};
	double* val;
	double* x;
	double* y;
	int* indx;
	int* pntrb;
	int* pntre;
	FILE *values;
	FILE* vector;
	FILE* index;
	FILE* pointerb;
	FILE* pointere;

	struct timespec start,end;

	/*printf("Enter the no of rows of the matrix, m=");
	scanf("%d",&m);

	//no of columns
	printf("Enter the no of columns of the matrix, k=");
	scanf("%d",&k);

	printf("Enter the no of non-zero elements of the matrix, nnz=");
	scanf("%d",&nnz);*/

	if(argc != 4){
		printf("Pass value of no of rows, no of columns and no of nonzero elements as arguments when you run the executable\n");
		printf("Example: ./csr 1000 1000 3000 \n");
		exit(-1);
	}

	m = atoi(argv[1]);
	k = atoi(argv[2]);
	nnz = atoi(argv[3]);

	//the condition if nnz = 0 is remaining

	//for (i = 0, i < nnz, i++)

	alpha = 1.0;
	beta = 0.0;
	//m = 1000000;
	//k = 1000000;
	//nnz = 1000000;
	val = (double*) malloc( sizeof(double)*(nnz));
	y = (double*) malloc( sizeof(double)*(m));

	indx = (int*) malloc( sizeof(int)*(nnz));
	pntrb = (int*) malloc( sizeof(int)*(m));
	pntre = (int*) malloc( sizeof(int)*(m));
	x = (double*) malloc( sizeof(double)*(k));






	i = 0;
	//Getting the column index
	index = fopen("index.txt","rb");
	while(!feof(index)){
    fscanf(index,"%d",&indx[i]);
    i++;
	}
	fclose(index);



	i = 0;
	//Getting the beginning row pointer
	pointerb = fopen("ptrb.txt","rb");
	while(!feof(pointerb)){
    fscanf(pointerb,"%d",&pntrb[i]);
    i++;
	}
	fclose(pointerb);



	i = 0;
	//Getting the end row pointer
	pointere = fopen("ptre.txt","rb");
	while(!feof(pointere)){
    fscanf(pointere,"%d",&pntre[i]);
    i++;
	}
	fclose(pointere);


	i = 0;
	//Getting the vector values
	vector = fopen("x.txt","rb");
	while(!feof(vector)){
    fscanf(vector,"%lf",&x[i]);
    i++;
	}
	fclose(vector);


	i = 0;
	//Getting the values of the matrix
	values = fopen("values.txt","rb");
	while(!feof(values)){
	//printf("point2, %d \n",i);
    fscanf(values,"%lf",&val[i]);
    i++;
	}
	fclose(values);






	clock_gettime(CLOCK_PROCESS_CPUTIME_ID, &start);
	mkl_dcsrmv("N", &m, &k, &alpha, "G", val, indx, pntrb, pntre, x, &beta, y);
	clock_gettime(CLOCK_PROCESS_CPUTIME_ID, &end);
	double runtime = ( end.tv_sec - start.tv_sec )+ (double)( end.tv_nsec - start.tv_nsec )/ (double)BILLION;
	printf("Elapsed time = %g seconds\n",
		runtime);



	return 0;
}

My initial experiments offloading MKL FFTs into the MIC (using C language in Linux) give me approximately 9.3 GFLOPS of performance, judging by the reported [MIC Time] numbers when I set the environment variable  OFFLOAD_REPORT to 1 (or 2). This is about 0.46% of the advertized peak performance of 2 TFLOPS. But in fact, it is much less than that if I take into account the time for the data movement inside the offload section [CPU Time in the "report").

Am I missing something?

I am curious to know if my numbers are way off or consistent with other benchmarks (I could not find any).

I would appreciate it if someone could point me to related information or to know if someone had a different (or similar) experience.

The bottom line is that I hope I need to do something to drastically improve its performance, but I ran out of ideas. Any help will be appreciated.

Thanks!

Fernando

Hello,

I'm using djacobix in Intel MKL. My testing machine is a virtual Windows Server 2012 with 16 CPUs, . I'm use the following statements in my code:

    mkl_set_dynamic(0);

    mkl_set_num_threads(12);

But when it runs, djacobix only uses 4 threads at a time. I found the topic "Why the MKL can only call 4 threads?" (https://software.intel.com/en-us/forums/topic/288645). It mentioned that "MKL uses just 1 thread per core". I set the environment variable "KMP_AFFINITY=verbose" as suggested, and it gave me the following outputs:

OMP: Info #204: KMP_AFFINITY: decoding x2APIC ids.

OMP: Info #205: KMP_AFFINITY: cpuid leaf 11 not supported - decoding legacy APIC ids.

OMP: Info #149: KMP_AFFINITY: Affinity capable, using global cpuid info

OMP: Info #154: KMP_AFFINITY: Initial OS proc set respected: {0,1,2,3,4,5,6,7,8,9,10,11,12,13,14,15}

OMP: Info #156: KMP_AFFINITY: 16 available OS procs

OMP: Info #157: KMP_AFFINITY: Uniform topology

OMP: Info #159: KMP_AFFINITY: 16 packages x 1 cores/pkg x 1 threads/core (16 total cores)

OMP: Info #242: KMP_AFFINITY: pid 2828 thread 0 bound to OS proc set {0,1,2,3,4,5,6,7,8,9,10,11,12,13,14,15}

OMP: Info #242: KMP_AFFINITY: pid 2828 thread 1 bound to OS proc set {0,1,2,3,4,5,6,7,8,9,10,11,12,13,14,15}

OMP: Info #242: KMP_AFFINITY: pid 2828 thread 5 bound to OS proc set {0,1,2,3,4,5,6,7,8,9,10,11,12,13,14,15}

2OMP: Info #242: KMP_AFFINITY: pid 2828 thread 3 bound to OS proc set {0,1,2,3,4,5,6,7,8,9,10,11,12,13,14,15}

2OMP: Info #242: KMP_AFFINITY: pid 2828 thread 4 bound to OS proc set {0,1,2,3,4,5,6,7,8,9,10,11,12,13,14,15}

04OMP: Info #242: KMP_AFFINITY: pid 2828 thread 6 bound to OS proc set {0,1,2,3,4,5,6,7,8,9,10,11,12,13,14,15}

OMP: Info #242: KMP_AFFINITY: pid 2828 thread 7 bound to OS proc set {0,1,2,3,4,5,6,7,8,9,10,11,12,13,14,15}

OMP: Info #242: KMP_AFFINITY: pid 2828 thread 2 bound to OS proc set {0,1,2,3,4,5,6,7,8,9,10,11,12,13,14,15}

OMP: Info #242: KMP_AFFINITY: pid 2828 thread 8 bound to OS proc set {0,1,2,3,4,5,6,7,8,9,10,11,12,13,14,15}

OMP: Info #242: KMP_AFFINITY: pid 2828 thread 9 bound to OS proc set {0,1,2,3,4,5,6,7,8,9,10,11,12,13,14,15}

OMP: Info #242: KMP_AFFINITY: pid 2828 thread 10 bound to OS proc set {0,1,2,3,4,5,6,7,8,9,10,11,12,13,14,15}

OMP: Info #242: KMP_AFFINITY: pid 2828 thread 11 bound to OS proc set {0,1,2,3,4,5,6,7,8,9,10,11,12,13,14,15}

Is it possible to use 12 threads in djacobix on this machine?

Thanks.

Hi,

I launched an Memory Error Analysis with Intel Inspector on simple test of the dgemm function and i got this warning:"uninitialized memory access"located on the dgemm call.

Here is my test (really simple !) :

void dgemm_test()
{
  double *A,*B,*C;
  double alpha, beta;
  int m,i;

  m = 10;
  A = (double*)mkl_malloc((m*m)*sizeof(double),128);
  B = (double*)mkl_malloc((m*m)*sizeof(double),128);
  C = (double*)mkl_malloc((m*m)*sizeof(double),128);

  for(i=0; i<m*m; i++){
    A[i] = (double)(rand() % (m*m)) / (double)(m*m);
    B[i] = (double)(rand() % (m*m)) / (double)(m*m);
    C[i] = 0.0;
  }

  alpha = 1.0;
  beta = 0.0;
  cblas_dgemm(CblasRowMajor, CblasNoTrans, CblasNoTrans, m, m, m, alpha, A, m, B, m, beta, C, m);

  mkl_free(A);
  mkl_free(B);
  mkl_free(C);
}

Each buffer seems to be initialized... Do I have to be worried about this warning ? Is it an expected behavior ?

My configuration: Intel Inspector XE 2013.  MKL: 11.1.2 (32bit mode). CPU: Xeon E5-1620. OS: W7 64bit (SP1).

Thanks in advance for your help !